RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ZNF383Q8NA42 475 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 NMES1Q9C002 83 aa19.26■□□□□ 0.67
SIX4-203ENST00000556952 NSD1Q96L73 2696 aaPredicted RBP19.26■□□□□ 0.67
SIX4-203ENST00000556952 RNASEK-C17orf49H0YIS7 233 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 FCGR3BO75015 233 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 IGKV1-39P01597 117 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 IGKV1D-39P04432 117 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 OR4S2Q8NH73 311 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 MRPL20Q9BYC9 149 aaKnown RBP19.25■□□□□ 0.67
SIX4-203ENST00000556952 PLEKHA2Q9HB19 425 aa19.25■□□□□ 0.67
SIX4-203ENST00000556952 HPRT1P00492 218 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 HTR1DP28221 377 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 CEACAM3P40198 252 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 ZNF816Q0VGE8 651 aaPredicted RBP19.24■□□□□ 0.67
SIX4-203ENST00000556952 DHRS7BQ6IAN0 325 aaPredicted RBP19.24■□□□□ 0.67
SIX4-203ENST00000556952 CLEC9AQ6UXN8 241 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 Q71RC1 249 aaPredicted RBP19.24■□□□□ 0.67
SIX4-203ENST00000556952 OR2T35Q8NGX2 323 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 LSM10Q969L4 123 aaKnown RBP19.24■□□□□ 0.67
SIX4-203ENST00000556952 OR10C1Q96KK4 312 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 C2orf50Q96LR7 162 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 SPIN2AQ99865 258 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 SPIN2BQ9BPZ2 258 aa19.24■□□□□ 0.67
SIX4-203ENST00000556952 MPTX1A8MV57 137 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 LEUTXA8MZ59 168 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 LY6LH3BQJ8 138 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 S1PR2O95136 353 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 APOA2P02652 100 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 IGHV4-31P0DP07 118 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 RRASP10301 218 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 UBE2E1P51965 193 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 RTL8BQ17RB0 113 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 NMSQ5H8A3 153 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 OR5AN1Q8NGI8 311 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 SEC22AQ96IW7 307 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 NABP2Q9BQ15 211 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 COMMD9Q9P000 198 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 C1QBP02746 253 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 GAPDHP04406 335 aaKnown RBP19.23■□□□□ 0.67
SIX4-203ENST00000556952 AKR1C2P52895 323 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 IAH1Q2TAA2 248 aaPredicted RBP19.23■□□□□ 0.67
SIX4-203ENST00000556952 ZFP69Q49AA0 526 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 RPEQ96AT9 228 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 SLC35D1Q9NTN3 355 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 DPM3Q9P2X0 92 aa19.23■□□□□ 0.67
SIX4-203ENST00000556952 WNK2Q9Y3S1 2297 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 BOLA2-SMG1P6H3BVE0 249 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 REG1BP48304 166 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 DIAPH2-AS1Q14236 149 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 MINOS1Q5TGZ0 78 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 FAM219AQ8IW50 185 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 RNASE11Q8TAA1 199 aaKnown RBP19.22■□□□□ 0.67
SIX4-203ENST00000556952 RRNAD1Q96FB5 475 aaKnown RBP19.22■□□□□ 0.67
SIX4-203ENST00000556952 RANBP3Q9H6Z4 567 aaPredicted RBP19.22■□□□□ 0.67
SIX4-203ENST00000556952 HIF1ANQ9NWT6 349 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 MINOS1-NBL1R4GNA1 71 aa19.22■□□□□ 0.67
SIX4-203ENST00000556952 H0YJW9 148 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 SLC25A6P12236 298 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 FGL1Q08830 312 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 TPTE2P1Q5T6R2 138 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 LHX4Q969G2 390 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 WDR89Q96FK6 387 aaPredicted RBP19.21■□□□□ 0.67
SIX4-203ENST00000556952 TBL2Q9Y4P3 447 aaKnown RBP19.21■□□□□ 0.67
SIX4-203ENST00000556952 AUP1Q9Y679 476 aa19.21■□□□□ 0.67
SIX4-203ENST00000556952 SONP18583 2426 aaKnown RBP19.2■□□□□ 0.66
SIX4-203ENST00000556952 IGKV1-5P01602 117 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 EPHA1P21709 976 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 MC5RP33032 325 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 RAB13P51153 203 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 THOC7Q6I9Y2 204 aaKnown RBP19.2■□□□□ 0.66
SIX4-203ENST00000556952 PDPNQ86YL7 162 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 ZBTB8BQ8NAP8 495 aaPredicted RBP19.2■□□□□ 0.66
SIX4-203ENST00000556952 MMP24Q9Y5R2 645 aa19.2■□□□□ 0.66
SIX4-203ENST00000556952 OOSP1A8MZH6 123 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 CRYZL1O95825 349 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 GZMKP49863 264 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 LGALS4P56470 323 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 PPP1R1CQ8WVI7 109 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 SVEP1Q4LDE5 3571 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 IGHV1-3A0A0C4DH29 117 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 A0A1B0GU03 582 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 MARCH11A6NNE9 402 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 G3V3Q6 166 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 SMLR1H3BR10 107 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 J3QLI3 93 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 KRASP01116 189 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 NQO2P16083 231 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 IL15RAQ13261 267 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 PDZD9Q8IXQ8 264 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 OR8H3Q8N146 312 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 R3HDM4Q96D70 268 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 WASHC3Q9Y3C0 194 aa19.19■□□□□ 0.66
SIX4-203ENST00000556952 A0A0G2JRQ6 117 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 CD5LO43866 347 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 P0C879 139 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 G6PCP35575 357 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 ERVK-16P61578 105 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 MIDNQ504T8 468 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 LDLRAD2Q5SZI1 272 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 OSR1Q8TAX0 266 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms