RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 K7EIL1 84 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 CRYZL1O95825 349 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 AADACP22760 399 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 SLC6A1P30531 599 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 LUMP51884 338 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-206ENST00000556461 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 FHL3Q13643 280 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 FXYD3Q14802 87 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 OR2B11Q5JQS5 317 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 UNQ5815/PRO19632Q6UWF5 114 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF562Q6V9R5 426 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 IDO2Q6ZQW0 420 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF645Q8N7E2 425 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 SAMD12Q8N8I0 201 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 BEST4Q8NFU0 473 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 OR11H1Q8NG94 326 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 GRPEL2Q8TAA5 225 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 C4orf3Q8WVX3 66 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 ARPC1AQ92747 370 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 SLC25A46Q96AG3 418 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 HARBI1Q96MB7 349 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 MS4A10Q96PG2 267 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 FOXA2Q9Y261 457 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-206ENST00000556461 VSIG4Q9Y279 399 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 RBMX2Q9Y388 322 aaKnown RBP6.29□□□□□ -1.4
VTI1B-206ENST00000556461 OR2W1Q9Y3N9 320 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 HUWE1Q7Z6Z7 4374 aaKnown RBP6.29□□□□□ -1.4
VTI1B-206ENST00000556461 TNCP24821 2201 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 SHOXO15266 292 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 XRCC3O43542 346 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 FCGR3BO75015 233 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 EIF4EP06730 217 aaKnown RBP6.28□□□□□ -1.4
VTI1B-206ENST00000556461 CTXN2P0C2S0 81 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 APELAP0DMC3 54 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 FCGR2CP31995 323 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 TAS2R20P59543 309 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 DEFA5Q01523 94 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 TAGLNQ01995 201 aaKnown RBP6.28□□□□□ -1.4
VTI1B-206ENST00000556461 EGFEM1PQ0D2K5 195 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 AKIRIN2Q53H80 203 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 ACTBL2Q562R1 376 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 UBE2NLQ5JXB2 153 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 TMEM65Q6PI78 240 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 CROCCP3Q8IVE0 287 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 OR5T1Q8NG75 326 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 UBE2E2Q96LR5 201 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 DIABLOQ9NR28 239 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 CCL28Q9NRJ3 127 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 COMMD3Q9UBI1 195 aa6.28□□□□□ -1.4
VTI1B-206ENST00000556461 IGHV4OR15-8A0A075B7B6 117 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 A0A087WW49 117 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 TNFSF12O43508 249 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM127O75204 238 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 RBMXL2O75526 392 aaKnown RBP6.27□□□□□ -1.41
VTI1B-206ENST00000556461 CNIH1O95406 144 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 DUS4LO95620 317 aaKnown RBP6.27□□□□□ -1.41
VTI1B-206ENST00000556461 SAA1P0DJI8 122 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-206ENST00000556461 LGALS7P47929 136 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 SLURP1P55000 103 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 ARPC4P59998 168 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 UBE2KP61086 200 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 RUNX1Q01196 453 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 CTF1Q16619 201 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 PRSS8Q16651 343 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 RTL8BQ17RB0 113 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM69Q5SWH9 247 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 C10orf55Q5SWW7 151 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 VKORC1L1Q8N0U8 176 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 SECTM1Q8WVN6 248 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 S100A16Q96FQ6 103 aaKnown RBP6.27□□□□□ -1.41
VTI1B-206ENST00000556461 ADTRPQ96IZ2 230 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 RHOVQ96L33 236 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 TAS2R8Q9NYW2 309 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 SCOCQ9UIL1 159 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 ANAPC10Q9UM13 185 aa6.27□□□□□ -1.41
VTI1B-206ENST00000556461 MSGN1A6NI15 193 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 SEC14L6B5MCN3 397 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 HPGDSO60760 199 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 GABARAPO95166 117 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 PPYP01298 95 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 PMP2P02689 132 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TRGV3P03979 118 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
VTI1B-206ENST00000556461 RRASP10301 218 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 MYOD1P15172 320 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 ELK1P19419 428 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 RFX2P48378 723 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 ALDH3B2P48448 385 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TPPP2P59282 170 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 FXYD4P59646 89 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF616Q08AN1 781 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM267Q0VDI3 215 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-206ENST00000556461 CBX3Q13185 183 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 VMA21Q3ZAQ7 101 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms