RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 UXS1Q8NBZ7 420 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 FBLIM1Q8WUP2 373 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 UQCC2Q9BRT2 126 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 TMEM59Q9BXS4 323 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 PLEKHJ1Q9NW61 149 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 BABAM2Q9NXR7 383 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 GHRLQ9UBU3 117 aa10.36□□□□□ -0.75
ACTN1-219ENST00000556432 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 IGHV3-23P01764 117 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 IFNA4P05014 189 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 MED14OSP0DP75 135 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 MYL12AP19105 171 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 HTR2CP28335 458 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 ARL3P36405 182 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN1-219ENST00000556432 RPS27AP62979 156 aaKnown RBP10.35□□□□□ -0.75
ACTN1-219ENST00000556432 MED22Q15528 200 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 PRSS8Q16651 343 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-219ENST00000556432 RHOXF1Q8NHV9 184 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 PTX4Q96A99 478 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 RNF183Q96D59 192 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 SLC29A1Q99808 456 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 SPIN2AQ99865 258 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 SPIN2BQ9BPZ2 258 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 HDHD3Q9BSH5 251 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-219ENST00000556432 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
ACTN1-219ENST00000556432 TMEM213A2RRL7 107 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 SRRM4A7MD48 611 aaKnown RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 XRCC3O43542 346 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 LALBAP00709 142 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 SCTP09683 121 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 UBBP0CG47 229 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 RBMS2Q15434 407 aaKnown RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 GLT8D1Q68CQ7 371 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 CLEC19AQ6UXS0 136 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 GGHQ92820 318 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 DERL3Q96Q80 235 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 NICN1Q9BSH3 213 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 RIMS4Q9H426 269 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 MRPS18AQ9NVS2 196 aaKnown RBP10.34□□□□□ -0.75
ACTN1-219ENST00000556432 RDH8Q9NYR8 311 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 FBXL7Q9UJT9 491 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 MGAT4AQ9UM21 535 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 S4R3C0 116 aa10.34□□□□□ -0.75
ACTN1-219ENST00000556432 CTRB1P17538 263 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 DCKP27707 260 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 UBE2KP61086 200 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 TMEM177Q53S58 311 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 CTRB2Q6GPI1 263 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 OR4A47Q6IF82 309 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 OR2C3Q8N628 320 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 TEX45Q8NA69 505 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 MFFQ9GZY8 342 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 AK3Q9UIJ7 227 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 MUC4Q99102 2169 aa10.33□□□□□ -0.76
ACTN1-219ENST00000556432 KIR2DL5BA0A0G2JN68 375 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 KIR2DL5BA0A0G2JPC4 375 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 DPPA5A6NC42 116 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 CREBL2O60519 120 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-219ENST00000556432 CRYZL1O95825 349 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 RRASP10301 218 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 TAGLNQ01995 201 aaKnown RBP10.32□□□□□ -0.76
ACTN1-219ENST00000556432 SMN1Q16637 294 aaKnown RBP10.32□□□□□ -0.76
ACTN1-219ENST00000556432 MRGPRG-AS1Q2M3A8 158 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 C10orf55Q5SWW7 151 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 SLC25A42Q86VD7 318 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 KIR2DL5AQ8N109 375 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 CBR4Q8N4T8 237 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 KIR2DL5BQ8NHK3 375 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 C11orf45Q8TAV5 145 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 C2CD4CQ8TF44 421 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 ZNF430Q9H8G1 570 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-219ENST00000556432 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 SDHAF2Q9NX18 166 aa10.32□□□□□ -0.76
ACTN1-219ENST00000556432 RBM7Q9Y580 266 aaKnown RBP10.32□□□□□ -0.76
ACTN1-219ENST00000556432 TRBV6-6A0A0A6YYG2 114 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 TRAV25A0A0B4J276 109 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 ERICH4A6NGS2 130 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 A8MWP6 167 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 BET1O15155 118 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 GSTT2P0CG29 244 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 GSTT2BP0CG30 244 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 MED21Q13503 144 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 ZNF585BQ52M93 769 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 C19orf35Q6ZS72 473 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 APH1BQ8WW43 257 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 CCDC140Q96MF4 163 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 S100A14Q9HCY8 104 aa10.31□□□□□ -0.76
ACTN1-219ENST00000556432 Q9N2K0 584 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms