RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LINC00205P59089 165 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 TMEM187Q14656 261 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 ANKRD55Q3KP44 614 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 ZNF695Q8IW36 515 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 C12orf45Q8N5I9 185 aaPredicted RBP8.91□□□□□ -0.98
TMEM260-208ENST00000555905 OR5AN1Q8NGI8 311 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 GLYATL2Q8WU03 294 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 C17orf50Q8WW18 174 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 DDB2Q92466 427 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 MS4A7Q9GZW8 240 aaPredicted RBP8.91□□□□□ -0.98
TMEM260-208ENST00000555905 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 WASHC3Q9Y3C0 194 aa8.91□□□□□ -0.98
TMEM260-208ENST00000555905 hCG_2014768A0A024R1R8 64 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 A0A0B4J2A0 478 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 A0A0U1RQK1 487 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 A0A1W2PPI3 338 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 RAMP3O60896 148 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 CDS2O95674 445 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 CRYZL1O95825 349 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 HPRT1P00492 218 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 FSHBP01225 129 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 FBP1P09467 338 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 BRS3P32247 399 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.98
TMEM260-208ENST00000555905 LPAR6P43657 344 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 FAM120AOSQ5T036 256 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 PDPNQ86YL7 162 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 DYNAPQ8N1N2 210 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 RBPMSQ93062 196 aaKnown RBP8.9□□□□□ -0.98
TMEM260-208ENST00000555905 IL22RA2Q969J5 263 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 AJUBAQ96IF1 538 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 TMEM56Q96MV1 263 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 AIFM2Q9BRQ8 373 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 MED28Q9H204 178 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 PLEKHA2Q9HB19 425 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 PRR13Q9NZ81 148 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 SHPKQ9UHJ6 478 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 TMEM56-RWDD3S4R434 201 aa8.9□□□□□ -0.98
TMEM260-208ENST00000555905 SETXQ7Z333 2677 aaKnown RBP8.89□□□□□ -0.99
TMEM260-208ENST00000555905 IGHV3-72A0A0B4J1Y9 119 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 S1PR2O95136 353 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 LY6G6DO95868 133 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 IFNA21P01568 189 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 CD1BP29016 333 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 BRWD1-AS2P59051 145 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 HABP2Q14520 560 aaPredicted RBP8.89□□□□□ -0.99
TMEM260-208ENST00000555905 ZNF585BQ52M93 769 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 TMEM268Q5VZI3 342 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
TMEM260-208ENST00000555905 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 RNASE11Q8TAA1 199 aaKnown RBP8.89□□□□□ -0.99
TMEM260-208ENST00000555905 FLYWCH2Q96CP2 140 aaKnown RBP8.89□□□□□ -0.99
TMEM260-208ENST00000555905 TMEM160Q9NX00 188 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 COMMD9Q9P000 198 aa8.89□□□□□ -0.99
TMEM260-208ENST00000555905 ZNF469Q96JG9 3925 aaPredicted RBP8.88□□□□□ -0.99
TMEM260-208ENST00000555905 A0A1B0GVG6 124 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 SHOXO15266 292 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 HRASP01112 189 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1-16P04430 117 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 FAM106CPP0CH98 169 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 NQO2P16083 231 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 PAX6P26367 422 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 AKR1C2P52895 323 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 ERVK-16P61578 105 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
TMEM260-208ENST00000555905 RPS16P62249 146 aaKnown RBP8.88□□□□□ -0.99
TMEM260-208ENST00000555905 SCGB2A2Q13296 93 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 HES1Q14469 280 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 CLEC9AQ6UXN8 241 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 DMBX1Q8NFW5 382 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 LHFPL5Q8TAF8 219 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 OSR1Q8TAX0 266 aaPredicted RBP8.88□□□□□ -0.99
TMEM260-208ENST00000555905 CFHR4Q92496 578 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 RRNAD1Q96FB5 475 aaKnown RBP8.88□□□□□ -0.99
TMEM260-208ENST00000555905 SMR3AQ99954 134 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 MEGF9Q9H1U4 602 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 RAB18Q9NP72 206 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 TMED3Q9Y3Q3 217 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 CELSR1Q9NYQ6 3014 aa8.88□□□□□ -0.99
TMEM260-208ENST00000555905 DBX1A6NMT0 343 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 VGLL3A8MV65 326 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 GOSR2O14653 212 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 VENTXO95231 258 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 MOSP00540 346 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 KRASP01116 189 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1D-33P01593 117 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1-33P01594 117 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1-39P01597 117 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1D-39P04432 117 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 SNRNP70P08621 437 aaKnown RBP8.87□□□□□ -0.99
TMEM260-208ENST00000555905 HOXB5P09067 269 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 LGALS7P47929 136 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 DYNLT3P51808 116 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 TMEM177Q53S58 311 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms