RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 LPAR6P43657 344 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 ZNF695Q8IW36 515 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 LGI3Q8N145 548 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 SLC35G3Q8N808 338 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 TMEM56Q96MV1 263 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 LIN7CQ9NUP9 197 aaKnown RBP8.27□□□□□ -1.09
SRP54-208ENST00000555557 HILPDAQ9Y5L2 63 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 AUP1Q9Y679 476 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 TMEM56-RWDD3S4R434 201 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 IGHV3-72A0A0B4J1Y9 119 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 A0A0B4J2A0 478 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 CENPVL3A0A0U1RRI6 287 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 ODF3BA8MYP8 253 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 SMLR1H3BR10 107 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 ZNF137PP52743 207 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 GGNBP1Q5YKI7 109 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 TGIF2LXQ8IUE1 241 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 DDB2Q92466 427 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 C18orf12Q96KH6 178 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 OR10C1Q96KK4 312 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 SHPKQ9UHJ6 478 aa8.27□□□□□ -1.09
SRP54-208ENST00000555557 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 LY6LH3BQJ8 138 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 S1PR2O95136 353 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 IL3RAP26951 378 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 HTR1DP28221 377 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 THBS3P49746 956 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 PXDC1Q5TGL8 231 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 FAM219AQ8IW50 185 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 OR5M8Q8NGP6 311 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 RBPMSQ93062 196 aaKnown RBP8.26□□□□□ -1.09
SRP54-208ENST00000555557 RPEQ96AT9 228 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 NABP2Q9BQ15 211 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 ZNF436Q9C0F3 470 aaPredicted RBP8.26□□□□□ -1.09
SRP54-208ENST00000555557 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 CR1P17927 2039 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 ZANQ9Y493 2812 aa8.26□□□□□ -1.09
SRP54-208ENST00000555557 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 KRASP01116 189 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 IGKV1-16P04430 117 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 G6PCP35575 357 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 UBE2E1P51965 193 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 LGALS4P56470 323 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 SSX2Q16385 188 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 RUSC1-AS1Q66K80 236 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 VKORC1L1Q8N0U8 176 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 DYNAPQ8N1N2 210 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 PIP4P2Q8N4L2 257 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 PDCD10Q9BUL8 212 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 PRELID3BQ9Y3B1 194 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 AMMECR1Q9Y4X0 333 aaPredicted RBP8.25□□□□□ -1.09
SRP54-208ENST00000555557 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 TRAV40A0A0B4J280 105 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 IGHV1-3A0A0C4DH29 117 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 H0YJW9 148 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 H7C2Y5 167 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 TRIM77I1YAP6 450 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 B3GALNT1O75752 331 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 IGKV1-5P01602 117 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 GAPDHP04406 335 aaKnown RBP8.25□□□□□ -1.09
SRP54-208ENST00000555557 IGHV4-38-2P0DP08 117 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 HLA-GP17693 338 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 SRPXP78539 464 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 BRD3OSQ6XYD6 125 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 MOB3BQ86TA1 216 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 OR5AN1Q8NGI8 311 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 ADTRPQ96IZ2 230 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 SLC35D1Q9NTN3 355 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 GSKIPQ9P0R6 139 aa8.25□□□□□ -1.09
SRP54-208ENST00000555557 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.097e-8■■■■■ 26.8
SRP54-208ENST00000555557 ABCA1O95477 2261 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 ITPR3Q14573 2671 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 IFNA21P01568 189 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 EPHA1P21709 976 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 CD24P25063 80 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 SAA4P35542 130 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 FAM71F2Q6NXP2 309 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 GSG1LQ6UXU4 331 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 SSX9Q7RTT3 188 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 AJUBAQ96IF1 538 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 HYLS1Q96M11 299 aa8.24□□□□□ -1.09
SRP54-208ENST00000555557 SOX21Q9Y651 276 aaPredicted RBP8.24□□□□□ -1.09
SRP54-208ENST00000555557 A0A1W2PPI3 338 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 NPFFO15130 113 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 OR2A4O95047 310 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 HPRT1P00492 218 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 ATF4P18848 351 aaPredicted RBP8.23□□□□□ -1.09
SRP54-208ENST00000555557 VDAC1P21796 283 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 GATA3P23771 443 aa8.23□□□□□ -1.09
SRP54-208ENST00000555557 AKR1C2P52895 323 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms