RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SLURP1P55000 103 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 NUDCD2Q8WVJ2 157 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 C5orf30Q96GV9 206 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 B9D2Q9BPU9 175 aa18.94■□□□□ 0.62
PRKCH-216ENST00000555542 ARPC1BO15143 372 aaKnown RBP18.93■□□□□ 0.62
PRKCH-216ENST00000555542 IGLV2-23P01705 113 aa18.93■□□□□ 0.62
PRKCH-216ENST00000555542 CTXN2P0C2S0 81 aa18.93■□□□□ 0.62
PRKCH-216ENST00000555542 VAX1Q5SQQ9 334 aa18.93■□□□□ 0.62
PRKCH-216ENST00000555542 DCSTAMPQ9H295 470 aa18.93■□□□□ 0.62
PRKCH-216ENST00000555542 RHBDL2Q9NX52 303 aa18.93■□□□□ 0.62
PRKCH-216ENST00000555542 IGHV4OR15-8A0A075B7B6 117 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 A0A087WW49 117 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 SAP30O75446 220 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 PJVKQ0ZLH3 352 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 VMA21Q3ZAQ7 101 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 TMEM177Q53S58 311 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 IDNKQ5T6J7 187 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 C11orf87Q6NUJ2 197 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 OR5T1Q8NG75 326 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 PHB2Q99623 299 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 RNF167Q9H6Y7 350 aa18.92■□□□□ 0.62
PRKCH-216ENST00000555542 ZNF256Q9Y2P7 627 aaPredicted RBP18.92■□□□□ 0.62
PRKCH-216ENST00000555542 CRYZL1O95825 349 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 CLEC2LP0C7M8 214 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 CD36P16671 472 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 NFYAP23511 347 aaPredicted RBP18.91■□□□□ 0.62
PRKCH-216ENST00000555542 DUTP33316 252 aaKnown RBP18.91■□□□□ 0.62
PRKCH-216ENST00000555542 ZNF429Q86V71 674 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 POC5Q8NA72 575 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 DLX4Q92988 240 aaPredicted RBP18.91■□□□□ 0.62
PRKCH-216ENST00000555542 DCUN1D5Q9BTE7 237 aa18.91■□□□□ 0.62
PRKCH-216ENST00000555542 C13orf42A0A1B0GVH6 325 aa18.9■□□□□ 0.62
PRKCH-216ENST00000555542 HSPB1P04792 205 aaKnown RBP18.9■□□□□ 0.62
PRKCH-216ENST00000555542 ZNF645Q8N7E2 425 aa18.9■□□□□ 0.62
PRKCH-216ENST00000555542 OR2W1Q9Y3N9 320 aa18.9■□□□□ 0.62
PRKCH-216ENST00000555542 ETV7Q9Y603 341 aa18.9■□□□□ 0.62
PRKCH-216ENST00000555542 CRYGBP07316 175 aa18.89■□□□□ 0.61
PRKCH-216ENST00000555542 KCTD21Q4G0X4 260 aa18.89■□□□□ 0.61
PRKCH-216ENST00000555542 CNIH2Q6PI25 160 aa18.89■□□□□ 0.61
PRKCH-216ENST00000555542 SRRM4A7MD48 611 aaKnown RBP18.88■□□□□ 0.61
PRKCH-216ENST00000555542 LINC00473A8K010 186 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 H3BUA1 57 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 TUSC2O75896 110 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 SCAND1P57086 179 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 TNXAQ16473 311 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 KCTD9Q7L273 389 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 ACOT12Q8WYK0 555 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 DDB2Q92466 427 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 RHOVQ96L33 236 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 TMEM68Q96MH6 324 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 ANXA10Q9UJ72 324 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 PRELID3BQ9Y3B1 194 aa18.88■□□□□ 0.61
PRKCH-216ENST00000555542 TRAV18A0A075B6X5 111 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 A0A0G2JLM5 398 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 MPPED1O15442 326 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 FCGR3BO75015 233 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 SLC22A5O76082 557 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 APELAP0DMC3 54 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 ARPC4P59998 168 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 UBE2KP61086 200 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 SSBP2P81877 361 aaPredicted RBP18.87■□□□□ 0.61
PRKCH-216ENST00000555542 OR2B11Q5JQS5 317 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 IDO2Q6ZQW0 420 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 TEX45Q8NA69 505 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 OR5H6Q8NGV6 325 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 OSR1Q8TAX0 266 aaPredicted RBP18.87■□□□□ 0.61
PRKCH-216ENST00000555542 COA4Q9NYJ1 87 aa18.87■□□□□ 0.61
PRKCH-216ENST00000555542 MRPS7Q9Y2R9 242 aaKnown RBP18.87■□□□□ 0.61
PRKCH-216ENST00000555542 SSX5O60225 188 aa18.86■□□□□ 0.61
PRKCH-216ENST00000555542 ACTL6BO94805 426 aa18.86■□□□□ 0.61
PRKCH-216ENST00000555542 RBMX2Q9Y388 322 aaKnown RBP18.86■□□□□ 0.61
PRKCH-216ENST00000555542 LSM4Q9Y4Z0 139 aaKnown RBP18.86■□□□□ 0.61
PRKCH-216ENST00000555542 CREBL2O60519 120 aaPredicted RBP18.85■□□□□ 0.61
PRKCH-216ENST00000555542 HLA-DQB1P01920 261 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 PRSS8Q16651 343 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 TIMM50Q3ZCQ8 353 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 SLC25A38Q96DW6 304 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 OR4C12Q96R67 309 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 RANGRFQ9HD47 186 aaPredicted RBP18.85■□□□□ 0.61
PRKCH-216ENST00000555542 VCX3AQ9NNX9 186 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 DIABLOQ9NR28 239 aa18.85■□□□□ 0.61
PRKCH-216ENST00000555542 ANKRD34BA5PLL1 514 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 MSGN1A6NI15 193 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 ACSM6Q6P461 480 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 BEST4Q8NFU0 473 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 OR6Q1Q8NGQ2 317 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 TCTEX1D2Q8WW35 142 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 SPATA2Q9UM82 520 aa18.84■□□□□ 0.61
PRKCH-216ENST00000555542 IGKV1D-13A0A0B4J2D9 117 aa18.83■□□□□ 0.6
PRKCH-216ENST00000555542 SAA1P0DJI8 122 aaPredicted RBP18.83■□□□□ 0.6
PRKCH-216ENST00000555542 IGKV1-13P0DP09 117 aa18.83■□□□□ 0.6
PRKCH-216ENST00000555542 ZP3P21754 424 aa18.83■□□□□ 0.6
PRKCH-216ENST00000555542 DEFA5Q01523 94 aa18.83■□□□□ 0.6
PRKCH-216ENST00000555542 SRSF12Q8WXF0 261 aaKnown RBP18.83■□□□□ 0.6
PRKCH-216ENST00000555542 HSD17B10Q99714 261 aaKnown RBP18.83■□□□□ 0.6
PRKCH-216ENST00000555542 ELOVL1Q9BW60 279 aa18.83■□□□□ 0.6
PRKCH-216ENST00000555542 A0A0A6YYH2 397 aa18.82■□□□□ 0.6
PRKCH-216ENST00000555542 A6NJ64 397 aa18.82■□□□□ 0.6
PRKCH-216ENST00000555542 AADACP22760 399 aa18.82■□□□□ 0.6
PRKCH-216ENST00000555542 CDK10Q15131 360 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms