RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RBMX2Q9Y388 322 aaKnown RBP10.66□□□□□ -0.7
SNX6-203ENST00000555416 NUBP2Q9Y5Y2 271 aa10.66□□□□□ -0.7
SNX6-203ENST00000555416 SPDEFO95238 335 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 CRYZL1O95825 349 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 ELK1P19419 428 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 FCGR2CP31995 323 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 ARPC4P59998 168 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 OR2B11Q5JQS5 317 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 TMEM69Q5SWH9 247 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 HARBI1Q96MB7 349 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 GNB4Q9HAV0 340 aa10.65□□□□□ -0.7
SNX6-203ENST00000555416 PRKDCP78527 4128 aaKnown RBP10.65□□□□□ -0.7
SNX6-203ENST00000555416 CCL24O00175 119 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 OR5H8P0DN80 308 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 CDX1P47902 265 aaPredicted RBP10.64□□□□□ -0.71
SNX6-203ENST00000555416 ZNF562Q6V9R5 426 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 IDO2Q6ZQW0 420 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 ZNF491Q8N8L2 437 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 LFNGQ8NES3 379 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 ABHD5Q8WTS1 349 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 OR5B12Q96R08 314 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 CCL28Q9NRJ3 127 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 TGP01266 2768 aa10.64□□□□□ -0.71
SNX6-203ENST00000555416 A0A1W2PN81 502 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 SHOXO15266 292 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 FCGR3BO75015 233 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 PPYP01298 95 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 APOA1P02647 267 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 CHRNA7P36544 502 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 MYCNOSP40205 109 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 CBX5P45973 191 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 LGALS7P47929 136 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 RFX2P48378 723 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 RAB9AP51151 201 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 RORCP51449 518 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 GNB1P62873 340 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 FXYD3Q14802 87 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 SPCS2Q15005 226 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 CDK10Q15131 360 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 RTL8BQ17RB0 113 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 ASPHD1Q5U4P2 390 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 FOXB2Q5VYV0 432 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 GPR141Q7Z602 305 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 LYSMD2Q8IV50 215 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 OR5AP2Q8NGF4 316 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 SECTM1Q8WVN6 248 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 ARPC1AQ92747 370 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 ADTRPQ96IZ2 230 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 ALX4Q9H161 411 aaPredicted RBP10.63□□□□□ -0.71
SNX6-203ENST00000555416 NECAP2Q9NVZ3 263 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 TAS2R8Q9NYW2 309 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 MRPS7Q9Y2R9 242 aaKnown RBP10.63□□□□□ -0.71
SNX6-203ENST00000555416 TNCP24821 2201 aa10.63□□□□□ -0.71
SNX6-203ENST00000555416 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 I3L521 148 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 TNFSF12O43508 249 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 PMP2P02689 132 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 RRASP10301 218 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 NAT1P18440 290 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 TAGLNQ01995 201 aaKnown RBP10.62□□□□□ -0.71
SNX6-203ENST00000555416 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 OVCH2Q7RTZ1 564 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 SNX29P2Q8IUI4 249 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 VKORC1L1Q8N0U8 176 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 GPX8Q8TED1 209 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 IFT46Q9NQC8 304 aa10.62□□□□□ -0.71
SNX6-203ENST00000555416 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
SNX6-203ENST00000555416 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 ZNF182P17025 639 aaPredicted RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 SLC6A1P30531 599 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 HOXD3P31249 432 aaPredicted RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 PRSS3P35030 304 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 FXYD4P59646 89 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 UBE2KP61086 200 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 PRSS8Q16651 343 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 AKIRIN2Q53H80 203 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 ACTBL2Q562R1 376 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 TMEM65Q6PI78 240 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 CLVS1Q8IUQ0 354 aaPredicted RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 TCTEX1D2Q8WW35 142 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 GIMAP1Q8WWP7 306 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 HSD17B10Q99714 261 aaKnown RBP10.61□□□□□ -0.71
SNX6-203ENST00000555416 SLC5A7Q9GZV3 580 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 MIXL1Q9H2W2 232 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 EHFQ9NZC4 300 aa10.61□□□□□ -0.71
SNX6-203ENST00000555416 RAMP3O60896 148 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 SLC22A5O76082 557 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 CNIH1O95406 144 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 APELAP0DMC3 54 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms