RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PDK2Q15119 407 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 MMDQ15546 238 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 CCDC122Q5T0U0 273 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 ELP2Q6IA86 826 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 FER1L6-AS1Q8NA97 138 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 TSTD1Q8NFU3 115 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 GTF2H4Q92759 462 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 MAL2Q969L2 176 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 UBE2WQ96B02 151 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 PPWD1Q96BP3 646 aaKnown RBP2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 CMBLQ96DG6 245 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 TCEAL4Q96EI5 215 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 EBPLQ9BY08 206 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 BTRCQ9Y297 605 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 CFAP46Q8IYW2 2715 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 TCHHQ07283 1943 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 PLXNB3Q9ULL4 1909 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 SPEGQ15772 3267 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 SIP14410 1827 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 WDR87Q6ZQQ6 2873 aa2.63□□□□□ -1.99
CKS1BP1-201ENST00000555221 A0A1B0GTI1 187 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 AQP9O43315 295 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 PSCAO43653 123 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 IGLV3-27P01718 113 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 GUSBP08236 651 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 CGB3P0DN86 165 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 CGB7P0DN87 165 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 ATF1P18846 271 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 S100A2P29034 98 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 HSPA13P48723 471 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 OR10A3P58181 314 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 RBM48Q5RL73 367 aaKnown RBP2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 SDHAF4Q5VUM1 108 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 LAIR2Q6ISS4 152 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 WDR59Q6PJI9 974 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 DEFB106AQ8N104 65 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 UBL4BQ8N7F7 174 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 LY6G5BQ8NDX9 201 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 REEP6Q96HR9 211 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 TRIB3Q96RU7 358 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 COMMD9Q9P000 198 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 ZNF230Q9UIE0 474 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 CCL26Q9Y258 94 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 ZNF443Q9Y2A4 671 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 DMDP11532 3685 aa2.62□□□□□ -1.99
CKS1BP1-201ENST00000555221 NAV3Q8IVL0 2385 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 TEX15Q9BXT5 2789 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 MYO15AQ9UKN7 3530 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 A6NED7 52 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 MIF4GDA9UHW6 222 aaKnown RBP2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 NPPAP01160 153 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 ZNF3P17036 446 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 TPI1P60174 286 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 XRCC4Q13426 336 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 HCP5Q6MZN7 132 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 C4orf22Q6V702 233 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 UMODL1-AS1Q8N2C9 162 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 FAM172AQ8WUF8 416 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 SLC25A44Q96H78 314 aaPredicted RBP2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 MCEEQ96PE7 176 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 OR2D2Q9H210 308 aa2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 TBL2Q9Y4P3 447 aaKnown RBP2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 UBR5O95071 2799 aaPredicted RBP2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 SPTAN1Q13813 2472 aaKnown RBP2.61□□□□□ -1.99
CKS1BP1-201ENST00000555221 NLRC5Q86WI3 1866 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 EP300Q09472 2414 aaPredicted RBP2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 GVINP1Q7Z2Y8 2422 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 KALRNO60229 2985 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 K7EQS6 105 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 PHYHO14832 338 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 PFDN6O15212 129 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 FGF16O43320 207 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 HCRTO43612 131 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 PROSCO94903 275 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 GYPCP04921 128 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 GP1BAP07359 652 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 MIPP30301 263 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 RPL26P61254 145 aaKnown RBP2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 SARNPP82979 210 aaKnown RBP2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 GNA12Q03113 381 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 DHRS2Q13268 280 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 PAFAH1B3Q15102 231 aaKnown RBP2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 SYPL2Q5VXT5 272 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 CYHR1Q6ZMK1 362 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 TAC4Q86UU9 113 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 NIT1Q86X76 327 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 ATP6V1G3Q96LB4 118 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 PRSS27Q9BQR3 290 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 FBXL15Q9H469 300 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 RPL26L1Q9UNX3 145 aaKnown RBP2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 HS3ST2Q9Y278 367 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 U3KQK5 164 aa2.6□□□□□ -1.99
CKS1BP1-201ENST00000555221 FAM186AA6NE01 2351 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 SPTBN2O15020 2390 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 CACNA1DQ01668 2161 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 TRBV24-1A0A075B6N3 115 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 A0A087X0T9 212 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 ERICH4A6NGS2 130 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms