RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 TAAR6Q96RI8 345 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 PROCRQ9UNN8 238 aa13.07□□□□□ -0.32
ARHGEF40-203ENST00000554514 TRBV23-1A0A0A0MS06 115 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 TRAV17A0A0B4J275 112 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 CXorf65A6NEN9 183 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 P0C879 139 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 RTP5Q14D33 572 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 ACSF3Q4G176 576 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 FRZBQ92765 325 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 PRR33A8MZF0 331 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 M0R1B8 84 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 M0R1X1 148 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 S100A2P29034 98 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 PSMB3P49720 205 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 CDPF1Q6NVV7 123 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 BHLHA15Q7RTS1 189 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 B4DEV8 164 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 RAB29O14966 203 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 RAB24Q969Q5 203 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 GGACTQ9BVM4 153 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 GPR61Q9BZJ8 451 aa13.06□□□□□ -0.32
ARHGEF40-203ENST00000554514 AQP7O14520 342 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 SPRY3O43610 288 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 PAGE4O60829 102 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 KITLGP21583 273 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 UBE2G2P60604 165 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 UTF1Q5T230 341 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 PRAMEF5Q5TYX0 476 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 C16orf82Q7Z2V1 217 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 SDSLQ96GA7 329 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 OTOGLQ3ZCN5 2332 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 CTXND1A0A1B0GTU2 59 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 IFNA10P01566 189 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR10D4PQ8NGN7 298 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 STARD4Q96DR4 205 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 P2RX4Q99571 388 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 AGMATQ9BSE5 352 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 AURKAIP1Q9NWT8 199 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
ARHGEF40-203ENST00000554514 TRAV38-1A0A0B4J264 116 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 C15orf65H3BRN8 121 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 TNFSF13O75888 250 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 CRYAAP02489 173 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 SOD3P08294 240 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 HCFC1P51610 2035 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 RPRMLQ8N4K4 120 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 PRR7Q8TB68 274 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 ABHD5Q8WTS1 349 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 LURAP1Q96LR2 239 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 PROP1O75360 226 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 SNX22Q96L94 193 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 PARLQ9H300 379 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 GAR1Q9NY12 217 aaKnown RBP13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 NAT8Q9UHE5 227 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
ARHGEF40-203ENST00000554514 ATP6V1FQ16864 119 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 CIB3Q96Q77 187 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR2V2Q96R30 315 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 DKK4Q9UBT3 224 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 TRAV3A0A0B4J244 114 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 DUTP33316 252 aaKnown RBP13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 BPIFB3P59826 476 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 PYY3Q5JQD4 70 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 PARD6GQ9BYG4 376 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 HEYLQ9NQ87 328 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
ARHGEF40-203ENST00000554514 C15orf62A8K5M9 175 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 IFNL4K9M1U5 179 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 SOX15O60248 233 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 BSXQ3C1V8 233 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 PARD6AQ9NPB6 346 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 ASCL3Q9NQ33 180 aa13.02□□□□□ -0.32
ARHGEF40-203ENST00000554514 SLC31A2O15432 143 aa13.02□□□□□ -0.33
ARHGEF40-203ENST00000554514 FABP4P15090 132 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms