RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 AKAP9Q99996 3911 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 IGKV1D-8A0A087WSZ0 117 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 IGSF23A1L1A6 192 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 NKX2-6A6NCS4 301 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CYB5BO43169 146 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SSSCA1O60232 199 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BKO60814 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 OR2J2O76002 312 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 NAPSAO96009 420 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LCATP04180 440 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BJP06899 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SERPINE2P07093 398 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 METTL15P1P0C7V9 234 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PAX1P15863 534 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 RAB4AP20338 218 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BOP23527 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 F2RP25116 425 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PPIFP30405 207 aaKnown RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SRD5A2P31213 254 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BBP33778 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SRP14P37108 136 aaKnown RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 AKR1C3P42330 323 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BDP58876 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TAS2R60P59551 318 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 FGF12P61328 243 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BCP62807 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LCN2P80188 198 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 RPL19P84098 196 aaKnown RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF92Q03936 586 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 JOSD1Q15040 202 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST2H2BEQ16778 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PHLDA2Q53GA4 152 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM41BQ5BJD5 291 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PYY3Q5JQD4 70 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SPIN3Q5JUX0 258 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 NCMAPQ5T1S8 102 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PLCXD3Q63HM9 321 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 OR2T2Q6IF00 324 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 KCNIP4Q6PIL6 250 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SLC25A26Q70HW3 274 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CENPVQ7Z7K6 275 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TBC1D26Q86UD7 250 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 DOLPP1Q86YN1 238 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 Q8IYB0 196 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CYB561D1Q8N8Q1 229 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 ZFP62Q8NB50 900 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 MDS2Q8NDY4 140 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 OR10G3Q8NGC4 313 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BHQ93079 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM45BQ96B21 275 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 DNAJA3Q96EY1 480 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 GMPPAQ96IJ6 420 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 TP53RKQ96S44 253 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BNQ99877 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H2BMQ99879 126 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CABLES2Q9BTV7 478 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 C20orf24Q9BUV8 137 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 C1QTNF5Q9BXJ0 243 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LINC00470Q9BZP3 86 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 MAGT1Q9H0U3 335 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SH3BGRL3Q9H299 93 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CDH20Q9HBT6 801 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SDF2L1Q9HCN8 221 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 Q9N2K0 584 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 GPR173Q9NS66 373 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LIN7CQ9NUP9 197 aaKnown RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LRFN1Q9P244 771 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LAMP3Q9UQV4 416 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 LIPGQ9Y5X9 500 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 CHCHD2Q9Y6H1 151 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-203ENST00000554264 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
VPS33B-203ENST00000554264 ANKHD1Q8IWZ3 2542 aaKnown RBP4.96□□□□□ -1.61
VPS33B-203ENST00000554264 DCHS2Q6V1P9 2916 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 FAM24AA6NFZ4 105 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 LRRC3CA6NJW4 275 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 OR5B21A6NL26 309 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 H0YL77 283 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 M0QZK8 103 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 TNFSF11O14788 317 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 SLC31A2O15432 143 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 ADAM20O43506 726 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 GGCTO75223 188 aaKnown RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 WISP2O76076 250 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 OR7C1O76099 320 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 TYMSP04818 313 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 CELA2AP08217 269 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 CHRNB4P30926 498 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 GNRHRP30968 328 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 OPRM1P35372 400 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 PSMB3P49720 205 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 FHITP49789 147 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 PDLIM4P50479 330 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 SSR4P51571 173 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 DYNLT3P51808 116 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms