RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 BAMBIQ13145 260 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 DHRS2Q13268 280 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 PHLDA2Q53GA4 152 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CT83Q5H943 113 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CT45A1Q5HYN5 189 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 Q5PR19 223 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 MINOS1Q5TGZ0 78 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 PRAMEF5Q5TYX0 476 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 DCAF12L2Q5VW00 463 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 ZFYVE26Q68DK2 2539 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CYB5R2Q6BCY4 276 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CCDC144NLQ6NUI1 221 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 GSG1LQ6UXU4 331 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CFAP47Q6ZTR5 3102 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 C5orf24Q7Z6I8 188 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 TBC1D26Q86UD7 250 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 SLC51BQ86UW2 128 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CADM3Q8N126 398 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 LYG1Q8N1E2 194 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 FGFRL1Q8N441 504 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 C11orf42Q8N5U0 333 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 DRAM1Q8N682 238 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 LRTM2Q8N967 370 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 ADAD2Q8NCV1 583 aaKnown RBP4.08□□□□□ -1.76
VTI1B-202ENST00000553619 BEND2Q8NDZ0 799 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CT45A3Q8NHU0 189 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CASTOR1Q8WTX7 329 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 MITD1Q8WV92 249 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 CAPSLQ8WWF8 208 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 IL22RA2Q969J5 263 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 AGMATQ9BSE5 352 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 FXYD6Q9H0Q3 95 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
VTI1B-202ENST00000553619 ZFP57Q9NU63 452 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 SDHAF2Q9NX18 166 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 DPM3Q9P2X0 92 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 TBL2Q9Y4P3 447 aaKnown RBP4.08□□□□□ -1.76
VTI1B-202ENST00000553619 INSIG2Q9Y5U4 225 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 AUP1Q9Y679 476 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 MINOS1-NBL1R4GNA1 71 aa4.08□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV2-26A0A0B4J1V2 119 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 IGKV1D-13A0A0B4J2D9 117 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 MEX3AA1L020 520 aaKnown RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 C5orf51A6NDU8 294 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 FAM157AC9JC47 383 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 H0Y980 276 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 BUB1B-PAK6H3BSN5 160 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 M0R1X1 148 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RBFOX2O43251 390 aaKnown RBP eCLIP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 FCN3O75636 299 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 MMP23AO75900 390 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 CCNKO75909 580 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 CDS2O95674 445 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 HPRT1P00492 218 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 HRASP01112 189 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TGFAP01135 160 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 APOA2P02652 100 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RLN2P04090 185 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ARG1P05089 322 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 OR5AC1P0C628 307 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 IGKV1-13P0DP09 117 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 CTRB1P17538 263 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 UCP1P25874 307 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 LPAR6P43657 344 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 GNG10P50151 68 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 UBE2E1P51965 193 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF134P52741 427 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 PAX2Q02962 417 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 FGL1Q08830 312 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 PPP1R1AQ13522 171 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM187Q14656 261 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 GNMTQ14749 295 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 SLC9A3R2Q15599 337 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RTL8BQ17RB0 113 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 HLA-DRB5Q30154 266 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 CTRB2Q6GPI1 263 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 DHRS7BQ6IAN0 325 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TCF23Q7RTU1 214 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 VMO1Q7Z5L0 202 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 AKAP14Q86UN6 197 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TGIF2LXQ8IUE1 241 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 FAM219AQ8IW50 185 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 PNKDQ8N490 385 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF439Q8NDP4 499 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 OR11H6Q8NGC7 330 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RNASE11Q8TAA1 199 aaKnown RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 GLYATL2Q8WU03 294 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TCTEX1D2Q8WW35 142 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RBPMSQ93062 196 aaKnown RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 LHX4Q969G2 390 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM230Q96A57 120 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 MRGPRFQ96AM1 343 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RPEQ96AT9 228 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 MALSU1Q96EH3 234 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 RRNAD1Q96FB5 475 aaKnown RBP4.07□□□□□ -1.76
VTI1B-202ENST00000553619 ABHD14BQ96IU4 210 aa4.07□□□□□ -1.76
VTI1B-202ENST00000553619 CYYR1Q96J86 154 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms