RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 FCN1O00602 326 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 ATP6V0E1O15342 81 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 VDAC1P21796 283 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 TSPAN5P62079 268 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 CD83Q01151 205 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 EIF4EBP1Q13541 118 aaPredicted RBP17.96■□□□□ 0.47
TDP1-206ENST00000553569 TMEM177Q53S58 311 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 ZNF660Q6AZW8 331 aaPredicted RBP17.96■□□□□ 0.47
TDP1-206ENST00000553569 DHRS11Q6UWP2 260 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 NDUFA11Q86Y39 141 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 ABHD5Q8WTS1 349 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 MOB3AQ96BX8 217 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 FXYD6Q9H0Q3 95 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 MTFP1Q9UDX5 166 aa17.96■□□□□ 0.47
TDP1-206ENST00000553569 IGLV2-23P01705 113 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 NDPQ00604 133 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 MSMO1Q15800 293 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 ACTBL2Q562R1 376 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 PYHIN1Q6K0P9 492 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 TREML4Q6UXN2 200 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 ZNF66Q6ZN08 573 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 ZNF818PQ6ZRF7 136 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 MFSD4AQ8N468 514 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 OR6F1Q8NGZ6 308 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 PLXNB1O43157 2135 aa17.95■□□□□ 0.46
TDP1-206ENST00000553569 GABARAPH6UMI1 98 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 CA2P00918 260 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 OPN1MWP04001 364 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 OPN1MW2P0DN77 364 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 OPN1MW3P0DN78 364 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 TNFSF8P32971 234 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 LGALS7P47929 136 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 CX3CL1P78423 397 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 FAM110DQ8TAY7 271 aaPredicted RBP17.94■□□□□ 0.46
TDP1-206ENST00000553569 GON7Q9BXV9 100 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 WSB1Q9Y6I7 421 aa17.94■□□□□ 0.46
TDP1-206ENST00000553569 SRRM4A7MD48 611 aaKnown RBP17.93■□□□□ 0.46
TDP1-206ENST00000553569 ADARB2-AS1A8MUL3 147 aa17.93■□□□□ 0.46
TDP1-206ENST00000553569 IGF1P05019 195 aa17.93■□□□□ 0.46
TDP1-206ENST00000553569 MRPS10P82664 201 aaKnown RBP17.93■□□□□ 0.46
TDP1-206ENST00000553569 RNASE10Q5GAN6 216 aaKnown RBP17.93■□□□□ 0.46
TDP1-206ENST00000553569 ZBTB34Q8NCN2 500 aa17.93■□□□□ 0.46
TDP1-206ENST00000553569 OR4S2Q8NH73 311 aa17.93■□□□□ 0.46
TDP1-206ENST00000553569 TINAGL1Q9GZM7 467 aaPredicted RBP17.93■□□□□ 0.46
TDP1-206ENST00000553569 TSSC4Q9Y5U2 329 aaPredicted RBP17.93■□□□□ 0.46
TDP1-206ENST00000553569 A3GALT2U3KPV4 340 aa17.93■□□□□ 0.46
TDP1-206ENST00000553569 G3V318 75 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 CD3DP04234 171 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 GNB1P62873 340 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 ECSCRQ19T08 205 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 VMA21Q3ZAQ7 101 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 VAX1Q5SQQ9 334 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 OSR1Q8TAX0 266 aaPredicted RBP17.92■□□□□ 0.46
TDP1-206ENST00000553569 SMIM4Q8WVI0 70 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 MMP27Q9H306 513 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 RABL2AQ9UBK7 228 aaPredicted RBP17.92■□□□□ 0.46
TDP1-206ENST00000553569 RABL2BQ9UNT1 228 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 FBXO7Q9Y3I1 522 aa17.92■□□□□ 0.46
TDP1-206ENST00000553569 IFNA6P05013 189 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 CRYGBP07316 175 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 GNRHRP30968 328 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 CATR1Q13166 79 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 AADACL3Q5VUY0 350 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 TEX38Q6PEX7 206 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 IDO2Q6ZQW0 420 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 LCNL1Q6ZST4 164 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 PPP1R27Q86WC6 154 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 COMMD1Q8N668 190 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 OR51H1Q8NH63 302 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 BORCS5Q969J3 196 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 R3HDM4Q96D70 268 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 FAM103A1Q9BTL3 118 aaKnown RBP17.91■□□□□ 0.46
TDP1-206ENST00000553569 ZNF580Q9UK33 172 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 WNK1Q9H4A3 2382 aa17.91■□□□□ 0.46
TDP1-206ENST00000553569 TRAV41A0A0B4J266 112 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 FABP12A6NFH5 140 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 CTDSPLO15194 276 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 KIR2DS2P43631 304 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 TAS2R19P59542 299 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 UBE2KP61086 200 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 CFHR3Q02985 330 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 PJVKQ0ZLH3 352 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 TMEM229BQ8NBD8 167 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 GRPEL2Q8TAA5 225 aa17.9■□□□□ 0.46
TDP1-206ENST00000553569 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 RLN1P04808 185 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 SAA1P0DJI8 122 aaPredicted RBP17.89■□□□□ 0.45
TDP1-206ENST00000553569 TBPP20226 339 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 S100A5P33763 92 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 BRWD1-AS2P59051 145 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 FXYD3Q14802 87 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 CXorf66Q5JRM2 361 aaPredicted RBP17.89■□□□□ 0.45
TDP1-206ENST00000553569 ZNF562Q6V9R5 426 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 SPAG16Q8N0X2 631 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 OR4D10Q8NGI6 311 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 ARPC1AQ92747 370 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 TRRAPQ9Y4A5 3859 aa17.89■□□□□ 0.45
TDP1-206ENST00000553569 GPR31O00270 319 aa17.88■□□□□ 0.45
TDP1-206ENST00000553569 ARPC1BO15143 372 aaKnown RBP17.88■□□□□ 0.45
TDP1-206ENST00000553569 RAMP3O60896 148 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms