RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 RAB22AQ9UL26 194 aa3.75□□□□□ -1.81
ATXN3-220ENST00000553491 TRAV1-2A0A0B4J238 106 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 A0A1W2PPI3 338 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 J3QRK9 145 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SLC22A1O15245 554 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 PDCD6O75340 191 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 HBZP02008 142 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SMIM18P0DKX4 95 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 MDKP21741 143 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SSTR5P35346 364 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 MNDAP41218 407 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 REG1BP48304 166 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 KCNJ3P48549 501 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RPS27AP62979 156 aaKnown RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 GAGE5Q13069 117 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 GAGE6Q13070 117 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 C17orf58Q2M2W7 97 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 KRTAP21-3Q3LHN1 58 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 KCTD21Q4G0X4 260 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 UTF1Q5T230 341 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 C6orf183Q5T699 404 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RSBN1Q5VWQ0 802 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 FAM53AQ6NSI3 398 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SPSB3Q6PJ21 355 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 HEPN1Q6WQI6 88 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF497Q6ZNH5 498 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 GDPGP1Q6ZNW5 385 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 C9orf139Q6ZV77 190 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 OR2W3Q7Z3T1 314 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RTN4RL2Q86UN3 420 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 TPRA1Q86W33 373 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 CROCCP3Q8IVE0 287 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 DYNAPQ8N1N2 210 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 OR56B1Q8NGI3 324 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 OR9G1Q8NH87 305 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SPATA3Q8NHX4 192 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 ZNF596Q8TC21 504 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 TOMM40LQ969M1 308 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RPEQ96AT9 228 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 GALMQ96C23 342 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RAB3CQ96E17 227 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 ARHGAP5-AS1Q96IT6 56 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 CYYR1Q96J86 154 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 C1orf147Q96MC9 270 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 CMSS1Q9BQ75 279 aaKnown RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 SULT4A1Q9BR01 284 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 ST6GALNAC5Q9BVH7 336 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 PECRQ9BY49 303 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 BEX1Q9HBH7 125 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 TAF9BQ9HBM6 251 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RAB9BQ9NP90 201 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 OR2S2Q9NQN1 319 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 ZNRD1Q9P1U0 126 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 DPM3Q9P2X0 92 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 AK3Q9UIJ7 227 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 PSG11Q9UQ72 335 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 TBL2Q9Y4P3 447 aaKnown RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 AMMECR1Q9Y4X0 333 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 RBM7Q9Y580 266 aaKnown RBP3.74□□□□□ -1.81
ATXN3-220ENST00000553491 COL6A5A8TX70 2615 aa3.74□□□□□ -1.81
ATXN3-220ENST00000553491 TRAV18A0A075B6X5 111 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 A0A0A6YYD4 124 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 IGHV3-72A0A0B4J1Y9 119 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 A0A1B0GUV1 79 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 TMEM89A2RUT3 159 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 IFITM5A6NNB3 132 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 NCBP2LA6PVI3 153 aaKnown RBP3.73□□□□□ -1.81
ATXN3-220ENST00000553491 TMEM14DPA8MWL7 114 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 C12orf77C9JDV5 145 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 BUB1B-PAK6H3BSN5 160 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 ORC5O43913 435 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 SC5DO75845 299 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 RBP4P02753 201 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 GAPDHP04406 335 aaKnown RBP3.73□□□□□ -1.81
ATXN3-220ENST00000553491 CSN2P05814 226 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 GLAP06280 429 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 FCER2P06734 321 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 GNB3P16520 340 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 IL3RAP26951 378 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 FGF9P31371 208 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-220ENST00000553491 PPP1CCP36873 323 aaKnown RBP3.73□□□□□ -1.81
ATXN3-220ENST00000553491 TGFBR1P36897 503 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 CEACAM6P40199 344 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 SERPINB10P48595 397 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 EFNB2P52799 333 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 RAG2P55895 527 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 VBP1P61758 197 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 UNC119Q13432 240 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 MADCAM1Q13477 382 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 CNPY1Q3B7I2 92 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 TIMM50Q3ZCQ8 353 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 CDNFQ49AH0 187 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 NHLRC3Q5JS37 347 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 GPR107Q5VW38 600 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 OLFML2AQ68BL7 652 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 TCF23Q7RTU1 214 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 OR8H3Q8N146 312 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 LYG1Q8N1E2 194 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 DRAM1Q8N682 238 aa3.73□□□□□ -1.81
ATXN3-220ENST00000553491 DRAXINQ8NBI3 349 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms