RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 S100A16Q96FQ6 103 aaKnown RBP14.99□□□□□ -0.01
PTCH1-227ENST00000553256 RCC1LQ96I51 464 aaKnown RBP14.99□□□□□ -0.01
PTCH1-227ENST00000553256 ADTRPQ96IZ2 230 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 UBE2E2Q96LR5 201 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 DUX3Q96PT4 197 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 GNB4Q9HAV0 340 aa14.99□□□□□ -0.01
PTCH1-227ENST00000553256 CD33P20138 364 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 RAB9AP51151 201 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 EGFEM1PQ0D2K5 195 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 MSMO1Q15800 293 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 DEFB136Q30KP8 78 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 FOXB2Q5VYV0 432 aa14.98□□□□□ -0.01
PTCH1-227ENST00000553256 FAM103A1Q9BTL3 118 aaKnown RBP14.98□□□□□ -0.01
PTCH1-227ENST00000553256 CCL24O00175 119 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 PRB2P02812 416 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-227ENST00000553256 RRASP10301 218 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 AADACP22760 399 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 HARBI1Q96MB7 349 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 CLCC1Q96S66 551 aa14.97□□□□□ -0.01
PTCH1-227ENST00000553256 MRPS26Q9BYN8 205 aaKnown RBP14.97□□□□□ -0.01
PTCH1-227ENST00000553256 J3QRK9 145 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 SLC22A5O76082 557 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 APOA1P02647 267 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 FCGR2CP31995 323 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 CBX5P45973 191 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 KRTAP10-11P60412 298 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 UBE2KP61086 200 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 LYSMD2Q8IV50 215 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 LFNGQ8NES3 379 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 OR5AP2Q8NGF4 316 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-227ENST00000553256 GIMAP1Q8WWP7 306 aa14.96□□□□□ -0.01
PTCH1-227ENST00000553256 FOXA2Q9Y261 457 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-227ENST00000553256 RBM7Q9Y580 266 aaKnown RBP14.96□□□□□ -0.01
PTCH1-227ENST00000553256 MEIS3P1A6NDR6 274 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 NUDT19A8MXV4 375 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 BRI3O95415 125 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 PPYP01298 95 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 ELK1P19419 428 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 FXYD3Q14802 87 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 RTL8BQ17RB0 113 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 ECSCRQ19T08 205 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 TMEM69Q5SWH9 247 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 DHRS11Q6UWP2 260 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 TEX45Q8NA69 505 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 GPX8Q8TED1 209 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 ARPC1AQ92747 370 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 NECAP2Q9NVZ3 263 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 AURKAIP1Q9NWT8 199 aaPredicted RBP14.95□□□□□ -0.02
PTCH1-227ENST00000553256 COMMD3Q9UBI1 195 aa14.95□□□□□ -0.02
PTCH1-227ENST00000553256 A0A1W2PN81 502 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 SHOXO15266 292 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 DUS4LO95620 317 aaKnown RBP14.94□□□□□ -0.02
PTCH1-227ENST00000553256 CRYZL1O95825 349 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 FCER2P06734 321 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 CHRNA7P36544 502 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 GNB1P62873 340 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 PLGLAQ15195 96 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 PRSS8Q16651 343 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 GPR107Q5VW38 600 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 MFSD4AQ8N468 514 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 CASTOR1Q8WTX7 329 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 ACOT12Q8WYK0 555 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 GPHA2Q96T91 129 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 HSD17B10Q99714 261 aaKnown RBP14.94□□□□□ -0.02
PTCH1-227ENST00000553256 CCL28Q9NRJ3 127 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 VSIG4Q9Y279 399 aa14.94□□□□□ -0.02
PTCH1-227ENST00000553256 RORCP51449 518 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 ARPC4P59998 168 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 CDK10Q15131 360 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 ACTBL2Q562R1 376 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 KCTD9Q7L273 389 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 OR5M8Q8NGP6 311 aa14.93□□□□□ -0.02
PTCH1-227ENST00000553256 HPGDSO60760 199 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 FCGR3BO75015 233 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 SAA1P0DJI8 122 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-227ENST00000553256 TMEM267Q0VDI3 215 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-227ENST00000553256 DYRK1AQ13627 763 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 UNQ5815/PRO19632Q6UWF5 114 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 ZNF66Q6ZN08 573 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 IDO2Q6ZQW0 420 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 REC114Q7Z4M0 266 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 RHOVQ96L33 236 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 A3GALT2U3KPV4 340 aa14.92□□□□□ -0.02
PTCH1-227ENST00000553256 ZNF182P17025 639 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-227ENST00000553256 GNRHRP30968 328 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 PRSS3P35030 304 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 RFX2P48378 723 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 SPCS2Q15005 226 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 PYHIN1Q6K0P9 492 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 TMEM65Q6PI78 240 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 PUSL1Q8N0Z8 303 aaKnown RBP14.91□□□□□ -0.02
PTCH1-227ENST00000553256 ZBTB34Q8NCN2 500 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 OR11H1Q8NG94 326 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 GRPEL2Q8TAA5 225 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 ALX4Q9H161 411 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-227ENST00000553256 ADAM30Q9UKF2 790 aa14.91□□□□□ -0.02
PTCH1-227ENST00000553256 RBMXL2O75526 392 aaKnown RBP14.9□□□□□ -0.02
PTCH1-227ENST00000553256 IL6RP08887 468 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms