RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 AKR1C1Q04828 323 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 SLAMF1Q13291 335 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 SPATA31B1PQ5VZV4 182 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 TNFAIP8L2Q6P589 184 aaPredicted RBP0.78□□□□□ -2.28
USP44-207ENST00000552237 COPS6Q7L5N1 327 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 STOML3Q8TAV4 291 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 DYNC2LI1Q8TCX1 351 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 RNASEH2CQ8TDP1 164 aaKnown RBP0.78□□□□□ -2.28
USP44-207ENST00000552237 ASB17Q8WXJ9 295 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 CMTM5Q96DZ9 223 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 CPNE2Q96FN4 548 aaPredicted RBP0.78□□□□□ -2.28
USP44-207ENST00000552237 Q96M85 177 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 TIPINQ9BVW5 301 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 MRPS26Q9BYN8 205 aaKnown RBP0.78□□□□□ -2.28
USP44-207ENST00000552237 TMEM222Q9H0R3 208 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 CYSTM1Q9H1C7 97 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 NRBP2Q9NSY0 501 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 PARVAQ9NVD7 372 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 FGFR1OP2Q9NVK5 253 aa0.78□□□□□ -2.28
USP44-207ENST00000552237 FN1P02751 2386 aaKnown RBP0.78□□□□□ -2.28
USP44-207ENST00000552237 DICER1Q9UPY3 1922 aaKnown RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 TEX50A0A1B0GTY4 177 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 TMEM213A2RRL7 107 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 C5orf49A4QMS7 147 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 METTL15A6NJ78 407 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 FTCDNL1E5RQL4 147 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 M0QX08 132 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 SLC16A4O15374 487 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 TOX3O15405 576 aaPredicted RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 CALUO43852 315 aaPredicted RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 CREBL2O60519 120 aaPredicted RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 ZNF737O75373 536 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 GPX2P18283 190 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 MYL12AP19105 171 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 DDTP30046 118 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 CEBPGP53567 150 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 MAGOHP61326 146 aaKnown RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 MED21Q13503 144 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 ZNHIT3Q15649 155 aaPredicted RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 CCDC122Q5T0U0 273 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 C9orf64Q5T6V5 341 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 TMEM42Q69YG0 159 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 PDPK2PQ6A1A2 396 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 OR10K2Q6IF99 312 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 HIST2H3AQ71DI3 136 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 BAP18Q8IXM2 172 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 DAND5Q8N907 189 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 LFNGQ8NES3 379 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 OR51T1Q8NGJ9 327 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 CLDND2Q8NHS1 167 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 JOSD2Q8TAC2 188 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 SLC7A6Q92536 515 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 GNB1LQ9BYB4 327 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 UPF3BQ9BZI7 483 aaKnown RBP0.77□□□□□ -2.29
USP44-207ENST00000552237 HES4Q9HCC6 221 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 TAAR3PQ9P1P4 343 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 PCDH15Q96QU1 1955 aa0.77□□□□□ -2.29
USP44-207ENST00000552237 KIAA2026Q5HYC2 2103 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 WDR90Q96KV7 1748 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 NUP153P49790 1475 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 GRIN2BQ13224 1484 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 NPATQ14207 1427 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 IGHV3-64A0A075B6Q5 118 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 C1orf232A0A0U1RR37 186 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 GOLGA6L19H0YKK7 550 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 PFDN6O15212 129 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 ATP8B1O43520 1251 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 KLRC4O43908 158 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 HPGDSO60760 199 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 NPYP01303 97 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 HIST1H1CP16403 213 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 ANP32AP39687 249 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 CCR2P41597 374 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 MAGEA2P43356 314 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 SLCO1A2P46721 670 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 RPL27AP46776 148 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 EVX1P49640 407 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 H2BFSP57053 126 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 TAS2R20P59543 309 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 SNAP25P60880 206 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 HIST1H4AP62805 103 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 CAV1Q03135 178 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 DMTNQ08495 405 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 PMS2P3Q13401 168 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 SPA17Q15506 151 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 NNATQ16517 81 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 NDUFA5Q16718 116 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 LPCAT4Q643R3 524 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 C5orf46Q6UWT4 87 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 SPATA12Q7Z6I5 190 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 LRRC34Q8IZ02 419 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 LINC00471Q8N535 108 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 TBC1D19Q8N5T2 526 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 OTUD6BQ8N6M0 293 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 PACRGLQ8N7B6 248 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 OR13C8Q8NGS7 320 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 ACOT12Q8WYK0 555 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 PACRGQ96M98 296 aaPredicted RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 DOHHQ9BU89 302 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 OR51I2Q9H344 312 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms