RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 NKX1-2Q9UD57 310 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-221ENST00000550914 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 A0A0B4J203 849 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 SHISA3A0PJX4 238 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 PTGES3LE9PB15 166 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 SHOXO15266 292 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 PSMD7P51665 324 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 UBE2KP61086 200 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 TPBGQ13641 420 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 IRF3Q14653 427 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 RCN1Q15293 331 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 VMA21Q3ZAQ7 101 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-221ENST00000550914 TMEM91Q6ZNR0 172 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 TEX45Q8NA69 505 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
PTCH1-221ENST00000550914 FAM3DQ96BQ1 224 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 ADTRPQ96IZ2 230 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 VCXQ9H320 206 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 SCN3BQ9NY72 215 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
PTCH1-221ENST00000550914 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
PTCH1-221ENST00000550914 BET1O15155 118 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 DENRO43583 198 aaKnown RBP9.75□□□□□ -0.85
PTCH1-221ENST00000550914 JTBO76095 146 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 FCGR3AP08637 254 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 CD3GP09693 182 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 OR9G9P0C7N8 305 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 PRSS8Q16651 343 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 C2orf76Q3KRA6 126 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 IGSF11Q5DX21 431 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 PHB2Q99623 299 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 ADAM30Q9UKF2 790 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 RAB22AQ9UL26 194 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 KCNK7Q9Y2U2 307 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
PTCH1-221ENST00000550914 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
PTCH1-221ENST00000550914 TRBV9A0A0B4J1U6 114 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 IZUMO1RA6ND01 250 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 CREBL2O60519 120 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-221ENST00000550914 Q6ZS49 121 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-221ENST00000550914 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
PTCH1-221ENST00000550914 DDB2Q92466 427 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 C5orf30Q96GV9 206 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 V9GY05 133 aa9.74□□□□□ -0.85
PTCH1-221ENST00000550914 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 BMPR1BO00238 502 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 TUSC2O75896 110 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 GSTT2P0CG29 244 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 GSTT2BP0CG30 244 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 GADD45AP24522 165 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 CLDN12P56749 244 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 CD81P60033 236 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 RPS25P62851 125 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 RHOGP84095 191 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 DEFA5Q01523 94 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 TNXAQ16473 311 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 KCTD12Q96CX2 325 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 SLC2A8Q9NY64 477 aa9.73□□□□□ -0.85
PTCH1-221ENST00000550914 ZNF230Q9UIE0 474 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 RBM7Q9Y580 266 aaKnown RBP9.73□□□□□ -0.85
PTCH1-221ENST00000550914 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.72□□□□□ -0.85
PTCH1-221ENST00000550914 MFNGO00587 321 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 MPPED1O15442 326 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 TPPPO94811 219 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 CRYZL1O95825 349 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 HSMCR30P0CW71 290 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 MLLT11Q13015 90 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-221ENST00000550914 EXOSC2Q13868 293 aaKnown RBP9.72□□□□□ -0.85
PTCH1-221ENST00000550914 CDK10Q15131 360 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 CD300EQ496F6 205 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-221ENST00000550914 SLC25A42Q86VD7 318 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 NEURL2Q9BR09 285 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 GINS4Q9BRT9 223 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 DUSP21Q9H596 190 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 ACOT13Q9NPJ3 140 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 ZC4H2Q9NQZ6 224 aa9.72□□□□□ -0.85
PTCH1-221ENST00000550914 TPRKBQ9Y3C4 175 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms