RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TEX45Q8NA69 505 aa17.6■□□□□ 0.41
SMARCD1-209ENST00000550477 GINS4Q9BRT9 223 aa17.6■□□□□ 0.41
SMARCD1-209ENST00000550477 MSGN1A6NI15 193 aa17.59■□□□□ 0.41
SMARCD1-209ENST00000550477 CASQ2O14958 399 aaPredicted RBP17.59■□□□□ 0.41
SMARCD1-209ENST00000550477 CRYGBP07316 175 aa17.59■□□□□ 0.41
SMARCD1-209ENST00000550477 CALRP27797 417 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-209ENST00000550477 FAM209BQ5JX69 171 aa17.59■□□□□ 0.41
SMARCD1-209ENST00000550477 TRBV6-7A0A0A0MS04 114 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 SHISA3A0PJX4 238 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 CSN3P07498 182 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 OR9G9P0C7N8 305 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 SNRPBP14678 240 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 CLDN12P56749 244 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 TNXAQ16473 311 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 PLAC9Q5JTB6 97 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 IL34Q6ZMJ4 242 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 TMEM91Q6ZNR0 172 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 CABLES2Q9BTV7 478 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 ACOT13Q9NPJ3 140 aa17.58■□□□□ 0.4
SMARCD1-209ENST00000550477 TUSC2O75896 110 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 GSTT2P0CG29 244 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 GSTT2BP0CG30 244 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 TALDO1P37837 337 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 SSBP2P81877 361 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 IGSF11Q5DX21 431 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 GFI1Q99684 422 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 SLC2A8Q9NY64 477 aa17.57■□□□□ 0.4
SMARCD1-209ENST00000550477 FAM223BA6NKX1 122 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 PDCD5O14737 125 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 JTBO76095 146 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 TPPPO94811 219 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 FCGR3AP08637 254 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 UBE2KP61086 200 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 RPS25P62851 125 aaKnown RBP17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 ATP5G2Q06055 141 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 MLLT11Q13015 90 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 DYRK1AQ13627 763 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 IRF3Q14653 427 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 FAM223AQ8IWN6 122 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 LAX1Q8IWV1 398 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 OSR1Q8TAX0 266 aaPredicted RBP17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 ACOT12Q8WYK0 555 aa17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 GAR1Q9NY12 217 aaKnown RBP17.56■□□□□ 0.4
SMARCD1-209ENST00000550477 METTL21EPA6NDL7 271 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 RGS10O43665 173 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 PRSS8Q16651 343 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 SLC25A42Q86VD7 318 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 ADAD2Q8NCV1 583 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 OR10R2Q8NGX6 335 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 SRSF12Q8WXF0 261 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 SPIN2AQ99865 258 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 SPIN2BQ9BPZ2 258 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 CCDC90BQ9GZT6 254 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 CEPT1Q9Y6K0 416 aa17.55■□□□□ 0.4
SMARCD1-209ENST00000550477 TMEM272A0A1B0GTI8 110 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 SRRM4A7MD48 611 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 CRYZL1O95825 349 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 APELAP0DMC3 54 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 RHOGP84095 191 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 ARFRP1Q13795 201 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 ARL6IP1Q15041 203 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 HES5Q5TA89 166 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 DYNLRB2Q8TF09 96 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 KCTD12Q96CX2 325 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 DCUN1D5Q9BTE7 237 aa17.54■□□□□ 0.4
SMARCD1-209ENST00000550477 A0A075B6Q4 140 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 TRBV12-3P01733 135 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 CD81P60033 236 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 DEFA5Q01523 94 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 ADAMTSL5Q6ZMM2 481 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 THAP7Q9BT49 309 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 DNAH7Q8WXX0 4024 aa17.53■□□□□ 0.4
SMARCD1-209ENST00000550477 GNB3P16520 340 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 DUTP33316 252 aaKnown RBP17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 EXOSC2Q13868 293 aaKnown RBP17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 MMD2Q8IY49 270 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 NECAP1Q8NC96 275 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 MGLLQ99685 303 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 AKIP1Q9NQ31 210 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 KCNK7Q9Y2U2 307 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 PRELID3BQ9Y3B1 194 aa17.52■□□□□ 0.4
SMARCD1-209ENST00000550477 SLC22A5O76082 557 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 RAB6AP20340 208 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 FABP5Q01469 135 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 NEURL2Q9BR09 285 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 DUSP21Q9H596 190 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 ADAM30Q9UKF2 790 aa17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 MRPS7Q9Y2R9 242 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-209ENST00000550477 DYNC2H1Q8NCM8 4307 aaKnown RBP17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 HIST1H1DP16402 221 aaKnown RBP17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 MYL9P24844 172 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 MAP2K4P45985 399 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 MECP2P51608 486 aaKnown RBP17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 CDK10Q15131 360 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 SSX1Q16384 188 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 IDO2Q6ZQW0 420 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 TTC9CQ8N5M4 171 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 MAFIPQ8WZ33 124 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 DDB2Q92466 427 aa17.5■□□□□ 0.39
SMARCD1-209ENST00000550477 PLEKHA3Q9HB20 300 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms