RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CNIH2Q6PI25 160 aa15.43■□□□□ 0.06
GCN1-207ENST00000550471 ZNF230Q9UIE0 474 aaPredicted RBP15.43■□□□□ 0.06
GCN1-207ENST00000550471 PRELID3BQ9Y3B1 194 aa15.43■□□□□ 0.06
GCN1-207ENST00000550471 ETV7Q9Y603 341 aa15.43■□□□□ 0.06
GCN1-207ENST00000550471 SAP30O75446 220 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 IGLV2-23P01705 113 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 CRYGBP07316 175 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 DUTP33316 252 aaKnown RBP15.42■□□□□ 0.06
GCN1-207ENST00000550471 GNG2P59768 71 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 UBE2KP61086 200 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 SFXN4Q6P4A7 337 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 ZNF645Q8N7E2 425 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 BVESQ8NE79 360 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 GRPEL2Q8TAA5 225 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 USMG5Q96IX5 58 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 WWC2-AS2Q96NR7 200 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 OR4C12Q96R67 309 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 FAM103A1Q9BTL3 118 aaKnown RBP15.42■□□□□ 0.06
GCN1-207ENST00000550471 TPSG1Q9NRR2 321 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 ZNF355PQ9NSJ1 428 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 DAPK2Q9UIK4 370 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 MRPS7Q9Y2R9 242 aaKnown RBP15.42■□□□□ 0.06
GCN1-207ENST00000550471 RRP15Q9Y3B9 282 aaKnown RBP15.42■□□□□ 0.06
GCN1-207ENST00000550471 OR2W1Q9Y3N9 320 aa15.42■□□□□ 0.06
GCN1-207ENST00000550471 FAM209BQ5JX69 171 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 ACSM6Q6P461 480 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 NR2C2APQ86WQ0 139 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 DDB2Q92466 427 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 DLX4Q92988 240 aaPredicted RBP15.41■□□□□ 0.06
GCN1-207ENST00000550471 ST6GALNAC5Q9BVH7 336 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 SMAD5-AS1Q9Y6J3 95 aa15.41■□□□□ 0.06
GCN1-207ENST00000550471 ACTL6BO94805 426 aa15.4■□□□□ 0.06
GCN1-207ENST00000550471 TIMM50Q3ZCQ8 353 aa15.4■□□□□ 0.06
GCN1-207ENST00000550471 CROCCP3Q8IVE0 287 aa15.4■□□□□ 0.06
GCN1-207ENST00000550471 MS4A10Q96PG2 267 aa15.4■□□□□ 0.06
GCN1-207ENST00000550471 PRR25Q96S07 402 aa15.4■□□□□ 0.06
GCN1-207ENST00000550471 HSD17B10Q99714 261 aaKnown RBP15.4■□□□□ 0.06
GCN1-207ENST00000550471 IGHV4OR15-8A0A075B7B6 117 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 A0A087WW49 117 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 A0A0B4J203 849 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 LY86O95711 162 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 HLA-DQB1P01920 261 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 LINC00205P59089 165 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 MSMO1Q15800 293 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 TATDN3Q17R31 274 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 KCTD21Q4G0X4 260 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 VSTM2AQ8TAG5 236 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 MAFIPQ8WZ33 124 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 AIFM2Q9BRQ8 373 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 RHBDL2Q9NX52 303 aa15.39■□□□□ 0.05
GCN1-207ENST00000550471 CRYZL1O95825 349 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 SDC2P34741 201 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 SLURP1P55000 103 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 PRSS8Q16651 343 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 OVCH2Q7RTZ1 564 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 SLC25A42Q86VD7 318 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 PHB2Q99623 299 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 TINAGL1Q9GZM7 467 aaPredicted RBP15.38■□□□□ 0.05
GCN1-207ENST00000550471 ALX4Q9H161 411 aaPredicted RBP15.38■□□□□ 0.05
GCN1-207ENST00000550471 DIABLOQ9NR28 239 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 ANXA10Q9UJ72 324 aa15.38■□□□□ 0.05
GCN1-207ENST00000550471 IGHV3-11P01762 117 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 CDK10Q15131 360 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 KCTD9Q7L273 389 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 MMD2Q8IY49 270 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 OR5T1Q8NG75 326 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 LGALS14Q8TCE9 139 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 SPIN2AQ99865 258 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 SPIN2BQ9BPZ2 258 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 VCX3AQ9NNX9 186 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 RBMX2Q9Y388 322 aaKnown RBP15.37■□□□□ 0.05
GCN1-207ENST00000550471 U3KQK5 164 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 SORL1Q92673 2214 aa15.37■□□□□ 0.05
GCN1-207ENST00000550471 TMEM235A6NFC5 223 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 SNRPBP14678 240 aaKnown RBP15.36■□□□□ 0.05
GCN1-207ENST00000550471 KIR2DS2P43631 304 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 CBX5P45973 191 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 C11orf87Q6NUJ2 197 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 ZNF66Q6ZN08 573 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 ZBTB34Q8NCN2 500 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 OR4S2Q8NH73 311 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 DCUN1D5Q9BTE7 237 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 OR51E2Q9H255 320 aa15.36■□□□□ 0.05
GCN1-207ENST00000550471 IGKV1D-8A0A087WSZ0 117 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 SRRM4A7MD48 611 aaKnown RBP15.35■□□□□ 0.05
GCN1-207ENST00000550471 LINC00473A8K010 186 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 MPPED1O15442 326 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 OR9G9P0C7N8 305 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 MAS1LP35410 378 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 ARPC4P59998 168 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 PJVKQ0ZLH3 352 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 TNXAQ16473 311 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 CASTOR1Q8WTX7 329 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 NUDCD2Q8WVJ2 157 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 SRSF12Q8WXF0 261 aaKnown RBP15.35■□□□□ 0.05
GCN1-207ENST00000550471 BORCS5Q969J3 196 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 C5orf30Q96GV9 206 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 COA4Q9NYJ1 87 aa15.35■□□□□ 0.05
GCN1-207ENST00000550471 SMIM30A4D0T7 59 aa15.34■□□□□ 0.05
GCN1-207ENST00000550471 MSGN1A6NI15 193 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms