RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, human

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP1A-208	ENST00000550102	TAS2R20	P59543	309 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	DEFB136	Q30KP8	78 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ANKRD13B	Q86YJ7	626 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	GRPEL2	Q8TAA5	225 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ACOT12	Q8WYK0	555 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SNAPC3	Q92966	411 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	MRPS7	Q9Y2R9	242 aa	Known RBP	13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PRELID3B	Q9Y3B1	194 aa		13.45	□□□□□ -0.26
CHMP1A-208	ENST00000550102	APOA1	P02647	267 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	EIF4E	P06730	217 aa	Known RBP	13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FCGR2C	P31995	323 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	RAB25	P57735	213 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	GNB1	P62873	340 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CTF1	Q16619	201 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	VMA21	Q3ZAQ7	101 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ACTBL2	Q562R1	376 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PYHIN1	Q6K0P9	492 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	UNQ5815/PRO19632	Q6UWF5	114 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OVCH2	Q7RTZ1	564 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	REC114	Q7Z4M0	266 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OR5AP2	Q8NGF4	316 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OSR1	Q8TAX0	266 aa	Predicted RBP	13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	UBE2E2	Q96LR5	201 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	DUX3	Q96PT4	197 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	HSD17B10	Q99714	261 aa	Known RBP	13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FAM103A1	Q9BTL3	118 aa	Known RBP	13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	NAA50	Q9GZZ1	169 aa	Known RBP	13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	KLK15	Q9H2R5	256 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	COMMD3	Q9UBI1	195 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	VSIG4	Q9Y279	399 aa		13.44	□□□□□ -0.26
CHMP1A-208	ENST00000550102	MEIS3P1	A6NDR6	274 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CNIH1	O95406	144 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PPY	P01298	95 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FCER2	P06734	321 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	EGR2	P11161	476 aa	Predicted RBP	13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	AADAC	P22760	399 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	RORC	P51449	518 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PRKDC	P78527	4128 aa	Known RBP	13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FXYD3	Q14802	87 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CDK10	Q15131	360 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	MSMO1	Q15800	293 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	AKIRIN2	Q53H80	203 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	GPR107	Q5VW38	600 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	GPR141	Q7Z602	305 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OR5M8	Q8NGP6	311 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SECTM1	Q8WVN6	248 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	TCTEX1D2	Q8WW35	142 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CMTM3	Q96MX0	182 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	MCRIP2	Q9BUT9	160 aa	Known RBP	13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ANAPC10	Q9UM13	185 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	NUBP2	Q9Y5Y2	271 aa		13.43	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SOX15	O60248	233 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FCGR3B	O75015	233 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	IGLV2-14	P01704	120 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CRYGB	P07316	175 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ALDH3B2	P48448	385 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	RAB9A	P51151	201 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	TAS2R46	P59540	309 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	UBE2K	P61086	200 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PJVK	Q0ZLH3	352 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OR2B11	Q5JQS5	317 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FOXB2	Q5VYV0	432 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ZNF491	Q8N8L2	437 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	LFNG	Q8NES3	379 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OR4S2	Q8NH73	311 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	AP3S1	Q92572	193 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	DPF1	Q92782	380 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	DCUN1D5	Q9BTE7	237 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	TAS2R8	Q9NYW2	309 aa		13.42	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SMIM31	A0A1B0GVY4	71 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SRRM4	A7MD48	611 aa	Known RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ARPC1B	O15143	372 aa	Known RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CREBL2	O60519	120 aa	Predicted RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PRB2	P02812	416 aa	Predicted RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CD40LG	P29965	261 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	PRSS3	P35030	304 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	HERV-K104	P61576	105 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	RPL30	P62888	115 aa	Known RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SSBP2	P81877	361 aa	Predicted RBP	13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	RUNX1	Q01196	453 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FHL3	Q13643	280 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	MZT2A	Q6P582	158 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	ZNF66	Q6ZN08	573 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	TEX45	Q8NA69	505 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SLC5A7	Q9GZV3	580 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	GNB4	Q9HAV0	340 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	EHF	Q9NZC4	300 aa		13.41	□□□□□ -0.26
CHMP1A-208	ENST00000550102	HPGDS	O60760	199 aa		13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	SAA1	P0DJI8	122 aa	Predicted RBP	13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	FXYD4	P59646	89 aa		13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	KIAA0141	Q14154	515 aa	Predicted RBP	13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	IDO2	Q6ZQW0	420 aa		13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	OR5H2	Q8NGV7	314 aa		13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102	CASTOR1	Q8WTX7	329 aa		13.4	□□□□□ -0.26
CHMP1A-208	ENST00000550102		I3L521	148 aa		13.39	□□□□□ -0.27
CHMP1A-208	ENST00000550102	OR8U8	P0C7N1	319 aa		13.39	□□□□□ -0.27
CHMP1A-208	ENST00000550102	NAT1	P18440	290 aa		13.39	□□□□□ -0.27
CHMP1A-208	ENST00000550102	ELK1	P19419	428 aa		13.39	□□□□□ -0.27
CHMP1A-208	ENST00000550102	KIR2DS2	P43631	304 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms