RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CD3GP09693 182 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 OR9G9P0C7N8 305 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 TMEM50BP56557 158 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 DEFA5Q01523 94 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 MED22Q15528 200 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 FAM209BQ5JX69 171 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 FAM223AQ8IWN6 122 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 TEX45Q8NA69 505 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 ADAD2Q8NCV1 583 aaKnown RBP10.3□□□□□ -0.76
TROAP-211ENST00000549891 UFD1Q92890 307 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 ADTRPQ96IZ2 230 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 CENPOQ9BU64 300 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 PLEKHA3Q9HB20 300 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 ADAM30Q9UKF2 790 aa10.3□□□□□ -0.76
TROAP-211ENST00000549891 RBM7Q9Y580 266 aaKnown RBP10.3□□□□□ -0.76
TROAP-211ENST00000549891 IZUMO1RA6ND01 250 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 EBAG9O00559 213 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 TUSC2O75896 110 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 ARL6IP5O75915 188 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 MECP2P51608 486 aaKnown RBP10.29□□□□□ -0.76
TROAP-211ENST00000549891 UBE2KP61086 200 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 TRAM1Q15629 374 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 TNXAQ16473 311 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 LINC00322Q6ZN03 302 aaPredicted RBP10.29□□□□□ -0.76
TROAP-211ENST00000549891 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 CABLES2Q9BTV7 478 aa10.29□□□□□ -0.76
TROAP-211ENST00000549891 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 PTGES3LE9PB15 166 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 DENRO43583 198 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 ACTL6BO94805 426 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 APELAP0DMC3 54 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 PSMA1P25786 263 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 PSMD7P51665 324 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 RHOGP84095 191 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 ATP5G2Q06055 141 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 EXOSC2Q13868 293 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 PRSS8Q16651 343 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 LIPKQ5VXJ0 399 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 SRSF12Q8WXF0 261 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 ACOT12Q8WYK0 555 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 FAM3DQ96BQ1 224 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 KCTD12Q96CX2 325 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 SPIN2AQ99865 258 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 SPIN2BQ9BPZ2 258 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 GINS4Q9BRT9 223 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 VCXQ9H320 206 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 RETNQ9HD89 108 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 AKIP1Q9NQ31 210 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 SCN3BQ9NY72 215 aa10.28□□□□□ -0.76
TROAP-211ENST00000549891 LSM2Q9Y333 95 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
TROAP-211ENST00000549891 SRRM4A7MD48 611 aaKnown RBP10.27□□□□□ -0.77
TROAP-211ENST00000549891 BMPR1BO00238 502 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 FCGR3AP08637 254 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 GADD45AP24522 165 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 C2orf76Q3KRA6 126 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 IGSF11Q5DX21 431 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 NECAP1Q8NC96 275 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.77
TROAP-211ENST00000549891 TMEM203Q969S6 136 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 RAB3CQ96E17 227 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 GFI1Q99684 422 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
TROAP-211ENST00000549891 ZNF230Q9UIE0 474 aaPredicted RBP10.27□□□□□ -0.77
TROAP-211ENST00000549891 RAB22AQ9UL26 194 aa10.27□□□□□ -0.77
TROAP-211ENST00000549891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.26□□□□□ -0.77
TROAP-211ENST00000549891 TRBV9A0A0B4J1U6 114 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 CRYZL1O95825 349 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 GSTT2P0CG29 244 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 GSTT2BP0CG30 244 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
TROAP-211ENST00000549891 CLDN12P56749 244 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 RCN1Q15293 331 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 SRD5A3Q9H8P0 318 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 V9GY05 133 aa10.26□□□□□ -0.77
TROAP-211ENST00000549891 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 RBMXL2O75526 392 aaKnown RBP10.25□□□□□ -0.77
TROAP-211ENST00000549891 CD7P09564 240 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 HSMCR30P0CW71 290 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
TROAP-211ENST00000549891 MAP2K4P45985 399 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 CDK10Q15131 360 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 OGFRL1Q5TC84 451 aaPredicted RBP10.25□□□□□ -0.77
TROAP-211ENST00000549891 TMEM91Q6ZNR0 172 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 SLC16A13Q7RTY0 426 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 TTC9CQ8N5M4 171 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 DEFB125Q8N687 156 aa10.25□□□□□ -0.77
TROAP-211ENST00000549891 DDB2Q92466 427 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms