RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SLC25A46Q96AG3 418 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 HARBI1Q96MB7 349 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 MS4A10Q96PG2 267 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 TSNAXQ99598 290 aaKnown RBP7.6□□□□□ -1.19
HDAC7-229ENST00000549883 RNF5Q99942 180 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 GON7Q9BXV9 100 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 VCX3AQ9NNX9 186 aa7.6□□□□□ -1.19
HDAC7-229ENST00000549883 WI2-2373I1.2A0A1W2PRP0 233 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 I3L521 148 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 SHOXO15266 292 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 XRCC3O43542 346 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 APELAP0DMC3 54 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 FCGR2CP31995 323 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 LUMP51884 338 aaPredicted RBP7.59□□□□□ -1.19
HDAC7-229ENST00000549883 TAS2R20P59543 309 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 FXYD3Q14802 87 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 CTF1Q16619 201 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 UBE2NLQ5JXB2 153 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 ZNF562Q6V9R5 426 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 ZNF645Q8N7E2 425 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 ARPC1AQ92747 370 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 RCC1LQ96I51 464 aaKnown RBP7.59□□□□□ -1.19
HDAC7-229ENST00000549883 DIABLOQ9NR28 239 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 CCL28Q9NRJ3 127 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 NECAP2Q9NVZ3 263 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 COMMD3Q9UBI1 195 aa7.59□□□□□ -1.19
HDAC7-229ENST00000549883 FOXA2Q9Y261 457 aaPredicted RBP7.59□□□□□ -1.19
HDAC7-229ENST00000549883 RBMX2Q9Y388 322 aaKnown RBP7.59□□□□□ -1.19
HDAC7-229ENST00000549883 K7EIL1 84 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 TNFSF12O43508 249 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 FCGR3BO75015 233 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 RBMXL2O75526 392 aaKnown RBP7.58□□□□□ -1.2
HDAC7-229ENST00000549883 SPDEFO95238 335 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 IGHV3-11P01762 117 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 CTXN2P0C2S0 81 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 OR5H8P0DN80 308 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 FHL3Q13643 280 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 GPR107Q5VW38 600 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 TMEM65Q6PI78 240 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 CROCCP3Q8IVE0 287 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 OR5T1Q8NG75 326 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 OR11H1Q8NG94 326 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 S100A16Q96FQ6 103 aaKnown RBP7.58□□□□□ -1.2
HDAC7-229ENST00000549883 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 TAS2R8Q9NYW2 309 aa7.58□□□□□ -1.2
HDAC7-229ENST00000549883 IGHV4OR15-8A0A075B7B6 117 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 A0A087WW49 117 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 A0A0A6YYH2 397 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 A6NJ64 397 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 HPGDSO60760 199 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 GABARAPO95166 117 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 PPYP01298 95 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 PMP2P02689 132 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 SAA1P0DJI8 122 aaPredicted RBP7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ELK1P19419 428 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 LGALS7P47929 136 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 RFX2P48378 723 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ALDH3B2P48448 385 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 FXYD4P59646 89 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ARPC4P59998 168 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 RTL8BQ17RB0 113 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 AKIRIN2Q53H80 203 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ACTBL2Q562R1 376 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 TMEM69Q5SWH9 247 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 KCTD9Q7L273 389 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ANKRD13BQ86YJ7 626 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 LYSMD2Q8IV50 215 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 OR1N2Q8NGR9 330 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 MRAPQ8TCY5 172 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 SECTM1Q8WVN6 248 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 ANAPC10Q9UM13 185 aa7.57□□□□□ -1.2
HDAC7-229ENST00000549883 RAMP3O60896 148 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 CNIH1O95406 144 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 MYOD1P15172 320 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 SLC6A1P30531 599 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 SLURP1P55000 103 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 UBE2KP61086 200 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 EGFEM1PQ0D2K5 195 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 PRSS8Q16651 343 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 RNASE12Q5GAN4 147 aaKnown RBP7.56□□□□□ -1.2
HDAC7-229ENST00000549883 C19orf35Q6ZS72 473 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 OVCH2Q7RTZ1 564 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 OR5AP2Q8NGF4 316 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 TCTEX1D2Q8WW35 142 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 DCUN1D4Q92564 292 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 ADTRPQ96IZ2 230 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 DCUN1D5Q9BTE7 237 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF430Q9H8G1 570 aaPredicted RBP7.56□□□□□ -1.2
HDAC7-229ENST00000549883 SCOCQ9UIL1 159 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 VSIG4Q9Y279 399 aa7.56□□□□□ -1.2
HDAC7-229ENST00000549883 MRPS7Q9Y2R9 242 aaKnown RBP7.56□□□□□ -1.2
HDAC7-229ENST00000549883 A0A1B0GW64 132 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 MSGN1A6NI15 193 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 E7EUB6 86 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 SULT1C2O00338 296 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TMEM127O75204 238 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms