RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 SHOXO15266 292 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 FCGR3BO75015 233 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 PEX14O75381 377 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 PGLYRP1O75594 196 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 ZNF735P0CB33 412 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 COMPP49747 757 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 KLF9Q13886 244 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 PLGLAQ15195 96 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 FBLN7Q53RD9 439 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 C9orf152Q5JTZ5 239 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 Q8N2B8 174 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 TCTEX1D1Q8N7M0 179 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 Q8N9W7 124 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 LINC01006Q8NI28 216 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 OSR1Q8TAX0 266 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 TRIM63Q969Q1 353 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 RITA1Q96K30 269 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.65
PTCH1-213ENST00000546820 FXYD6Q9H0Q3 95 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 AKIP1Q9NQ31 210 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 RNF114Q9Y508 228 aa10.96□□□□□ -0.65
PTCH1-213ENST00000546820 NAP1L6A6NFF2 107 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 RRHO14718 337 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 SPDEFO95238 335 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 CRYZL1O95825 349 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 AMY1AP04745 511 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 RPL30P62888 115 aaKnown RBP10.95□□□□□ -0.66
PTCH1-213ENST00000546820 ZNF846Q147U1 533 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-213ENST00000546820 BAK1Q16611 211 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 C5orf64Q2M2E5 130 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 PHLDA2Q53GA4 152 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 TMEM177Q53S58 311 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 LIN54Q6MZP7 749 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 FAAP20Q6NZ36 180 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 IDO2Q6ZQW0 420 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 OR51S1Q8NGJ8 323 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 TAF15Q92804 592 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCH1-213ENST00000546820 MDFIQ99750 246 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 CCDC32Q9BV29 185 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 ZNF702PQ9H963 129 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 SLC2A8Q9NY64 477 aa10.95□□□□□ -0.66
PTCH1-213ENST00000546820 C14orf166Q9Y224 244 aaKnown RBP10.95□□□□□ -0.66
PTCH1-213ENST00000546820 RBFOX2O43251 390 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCH1-213ENST00000546820 KCNAB3O43448 404 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 NDUFA3O95167 84 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 HRASP01112 189 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-213ENST00000546820 CD40LGP29965 261 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 VDAC2P45880 294 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-213ENST00000546820 PPP5CP53041 499 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 PSG5Q15238 335 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 VMA21Q3ZAQ7 101 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 AWAT1Q58HT5 328 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 SPAG16Q8N0X2 631 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 FAM71E2Q8N5Q1 922 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 CCDC71LQ8N9Z2 235 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 OR51H1Q8NH63 302 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 HARBI1Q96MB7 349 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 COPZ2Q9P299 210 aa10.94□□□□□ -0.66
PTCH1-213ENST00000546820 METTL1Q9UBP6 276 aaKnown RBP10.94□□□□□ -0.66
PTCH1-213ENST00000546820 HPRT1P00492 218 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 RLN1P04808 185 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 CTSDP07339 412 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-213ENST00000546820 IL7P13232 177 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 F2RP25116 425 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 CNTFRP26992 372 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 RND3P61587 244 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 OR2B11Q5JQS5 317 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 SLC35E3Q7Z769 313 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 FOXRED2Q8IWF2 684 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 C3orf56Q8N813 242 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 OR13C8Q8NGS7 320 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 MARCH1Q8TCQ1 289 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 RBMXL1Q96E39 390 aaKnown RBP10.93□□□□□ -0.66
PTCH1-213ENST00000546820 GPHA2Q96T91 129 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 SDHCQ99643 169 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-213ENST00000546820 SLC25A21Q9BQT8 299 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-213ENST00000546820 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
PTCH1-213ENST00000546820 SLC2A9Q9NRM0 540 aa10.93□□□□□ -0.66
PTCH1-213ENST00000546820 FBN1P35555 2871 aaKnown RBP10.92□□□□□ -0.66
PTCH1-213ENST00000546820 SH2D7A6NKC9 451 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-213ENST00000546820 HAX1O00165 279 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 MPPED1O15442 326 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 SLC25A17O43808 307 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 IGHG2P01859 326 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 PIGPP57054 158 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 UBE2KP61086 200 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 Q6ZS46 218 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 TBC1D26Q86UD7 250 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 TEX45Q8NA69 505 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 VSTM2AQ8TAG5 236 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 FBXL15Q9H469 300 aa10.92□□□□□ -0.66
PTCH1-213ENST00000546820 PLEKHA2Q9HB19 425 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms