RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 OR2C1O95371 312 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 CBLN1P23435 193 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 HTR2CP28335 458 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 YIF1BQ5BJH7 314 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 ZNF57Q68EA5 555 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-208ENST00000546534 Q6ZWC4 215 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 MOB1BQ7L9L4 216 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 ZFP41Q8N8Y5 198 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 PTX4Q96A99 478 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 PGLYRP3Q96LB9 341 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 HARBI1Q96MB7 349 aa9.48□□□□□ -0.89
SCAF11-208ENST00000546534 LGALS9O00182 355 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 MPPED1O15442 326 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 GGCTO75223 188 aaKnown RBP9.47□□□□□ -0.89
SCAF11-208ENST00000546534 SCAF4O95104 1147 aaKnown RBP9.47□□□□□ -0.89
SCAF11-208ENST00000546534 SCTP09683 121 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 RPS27AP62979 156 aaKnown RBP9.47□□□□□ -0.89
SCAF11-208ENST00000546534 TNXAQ16473 311 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 SMN1Q16637 294 aaKnown RBP9.47□□□□□ -0.89
SCAF11-208ENST00000546534 C1orf146Q5VVC0 180 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 APH1BQ8WW43 257 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 UQCC2Q9BRT2 126 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 NICN1Q9BSH3 213 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 HDHD3Q9BSH5 251 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-208ENST00000546534 GHRLQ9UBU3 117 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 MLXQ9UH92 298 aa9.47□□□□□ -0.89
SCAF11-208ENST00000546534 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 SHOXO15266 292 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 DCKP27707 260 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 APOC4P55056 127 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 HLA-DRB3P79483 266 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 PRSS8Q16651 343 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 ANKRD55Q3KP44 614 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 TMEM177Q53S58 311 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 UXS1Q8NBZ7 420 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-208ENST00000546534 NECAP1Q8NC96 275 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 SRSF12Q8WXF0 261 aaKnown RBP9.46□□□□□ -0.9
SCAF11-208ENST00000546534 DERL3Q96Q80 235 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 SLC29A1Q99808 456 aa9.46□□□□□ -0.9
SCAF11-208ENST00000546534 EXOSC1Q9Y3B2 195 aaKnown RBP9.46□□□□□ -0.9
SCAF11-208ENST00000546534 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 OR2J3O76001 311 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 XP32Q5T750 250 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 IDO2Q6ZQW0 420 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 CBR4Q8N4T8 237 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 TMEM217Q8N7C4 229 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 NKAIN3Q8N8D7 197 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 ACOT12Q8WYK0 555 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 RNF183Q96D59 192 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 TMEM59Q9BXS4 323 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 RIMS4Q9H426 269 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-208ENST00000546534 KCNK15Q9H427 330 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 RDH8Q9NYR8 311 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 CLEC2DQ9UHP7 191 aa9.45□□□□□ -0.9
SCAF11-208ENST00000546534 PNMA8CA0A1B0GUJ8 204 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF320A2RRD8 509 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 UBE2CO00762 179 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 WBP4O75554 376 aaKnown RBP9.44□□□□□ -0.9
SCAF11-208ENST00000546534 UBBP0CG47 229 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 UBE2KP61086 200 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 FAM209BQ5JX69 171 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 BTNL8Q6UX41 500 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 PYDC1Q8WXC3 89 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 TM2D1Q9BX74 207 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 Q9N2K0 584 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 AK3Q9UIJ7 227 aa9.44□□□□□ -0.9
SCAF11-208ENST00000546534 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 A0A0A6YYD4 124 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 A8MWP6 167 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 CBX3Q13185 183 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 UNC119Q13432 240 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 RTL8BQ17RB0 113 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 VMA21Q3ZAQ7 101 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF485Q8NCK3 441 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 C5orf30Q96GV9 206 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 SPIN2AQ99865 258 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 SPIN2BQ9BPZ2 258 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 OR2D2Q9H210 308 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF430Q9H8G1 570 aaPredicted RBP9.43□□□□□ -0.9
SCAF11-208ENST00000546534 SDHAF2Q9NX18 166 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 MGAT4AQ9UM21 535 aa9.43□□□□□ -0.9
SCAF11-208ENST00000546534 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms