RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 LPCAT3Q6P1A2 487 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 TOMM5Q8N4H5 51 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 TCTEX1D2Q8WW35 142 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 MRGPRFQ96AM1 343 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 LIN7CQ9NUP9 197 aaKnown RBP16.49■□□□□ 0.23
SCARB1-211ENST00000546215 RNF114Q9Y508 228 aa16.49■□□□□ 0.23
SCARB1-211ENST00000546215 DISC1C4P0D8 188 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 GPR31O00270 319 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 FCGR3BO75015 233 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 PEX14O75381 377 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 AP3S2P59780 193 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 TMEM177Q53S58 311 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 CMTM1Q8IZ96 169 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 SLC38A6Q8IZM9 456 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 RASL11BQ9BPW5 248 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 SERTAD4Q9NUC0 356 aa16.48■□□□□ 0.23
SCARB1-211ENST00000546215 PGLYRP1O75594 196 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-211ENST00000546215 PROK1P58294 105 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 CBX3Q13185 183 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 C5orf64Q2M2E5 130 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 OR2B11Q5JQS5 317 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 SLC2A8Q9NY64 477 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 DNHD1Q96M86 4753 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 SRRM4A7MD48 611 aaKnown RBP16.47■□□□□ 0.23
SCARB1-211ENST00000546215 RRHO14718 337 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 CRYZL1O95825 349 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 LGALS7P47929 136 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 PSG5Q15238 335 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 TMEM95Q3KNT9 176 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 PHLDA2Q53GA4 152 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 C9orf152Q5JTZ5 239 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 OR51S1Q8NGJ8 323 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 TSNAXQ99598 290 aaKnown RBP16.47■□□□□ 0.23
SCARB1-211ENST00000546215 PRRT1Q99946 306 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 HRASLSQ9HDD0 168 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 KIAA1456Q9P272 454 aa16.47■□□□□ 0.23
SCARB1-211ENST00000546215 PLXNB1O43157 2135 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 SHOXO15266 292 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 IGLV2-23P01705 113 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 IGHG2P01859 326 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 PPP5CP53041 499 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 CATR1Q13166 79 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 C12orf54Q6X4T0 127 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 OR13C8Q8NGS7 320 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 OR51H1Q8NH63 302 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 DEDD2Q8WXF8 326 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 FBXL15Q9H469 300 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 MCUBQ9NWR8 336 aa16.46■□□□□ 0.23
SCARB1-211ENST00000546215 RAMP3O60896 148 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 SPDEFO95238 335 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 RLN1P04808 185 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 PGAM2P15259 253 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 KIR2DS2P43631 304 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 VDAC2P45880 294 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-211ENST00000546215 OR4S2Q8NH73 311 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 OSR1Q8TAX0 266 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-211ENST00000546215 MARCH1Q8TCQ1 289 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 S100ZQ8WXG8 99 aa16.45■□□□□ 0.22
SCARB1-211ENST00000546215 LINC01548A6NM66 108 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 IL7P13232 177 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 PI3P19957 117 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 FAUP35544 74 aaKnown RBP16.44■□□□□ 0.22
SCARB1-211ENST00000546215 ARSJQ5FYB0 599 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-211ENST00000546215 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 ZNF57Q68EA5 555 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-211ENST00000546215 LIN54Q6MZP7 749 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 IDO2Q6ZQW0 420 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 SPAG16Q8N0X2 631 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 ZNF486Q96H40 463 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-211ENST00000546215 HSPB9Q9BQS6 159 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 SLC2A9Q9NRM0 540 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 SCP2D1Q9UJQ7 156 aa16.44■□□□□ 0.22
SCARB1-211ENST00000546215 RBFOX2O43251 390 aaKnown RBP eCLIP16.43■□□□□ 0.223e-8■■■■■ 62.6
SCARB1-211ENST00000546215 SLC25A17O43808 307 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 HLA-DRB1P01911 266 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 CRYGBP07316 175 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 ECI1P42126 302 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 SPATA3Q8NHX4 192 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 ZFAND1Q8TCF1 268 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 WNT10AQ9GZT5 417 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 METTL1Q9UBP6 276 aaKnown RBP16.43■□□□□ 0.22
SCARB1-211ENST00000546215 HAX1O00165 279 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 FCN1O00602 326 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 VSIG10L2P0DP72 767 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 S100GP29377 79 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 RND3P61587 244 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 SURF2Q15527 256 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-211ENST00000546215 SLC35E3Q7Z769 313 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 TBC1D26Q86UD7 250 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 WFDC12Q8WWY7 111 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 TPSG1Q9NRR2 321 aa16.43■□□□□ 0.22
SCARB1-211ENST00000546215 F2RP25116 425 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 INPP1P49441 399 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 PIGPP57054 158 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 KRTAP10-3P60369 221 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 PLGLAQ15195 96 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 POC5Q8NA72 575 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
SCARB1-211ENST00000546215 GPR132Q9UNW8 380 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms