RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ATP6V1G2O95670 118 aa17.51■□□□□ 0.39
CHD4-214ENST00000545942 H1FOOQ8IZA3 346 aaPredicted RBP17.51■□□□□ 0.39
CHD4-214ENST00000545942 ADTRPQ96IZ2 230 aa17.51■□□□□ 0.39
CHD4-214ENST00000545942 TMEM68Q96MH6 324 aa17.51■□□□□ 0.39
CHD4-214ENST00000545942 TXNL4BQ9NX01 149 aaKnown RBP17.51■□□□□ 0.39
CHD4-214ENST00000545942 ELF5Q9UKW6 265 aaPredicted RBP17.51■□□□□ 0.39
CHD4-214ENST00000545942 IGKV1D-8A0A087WSZ0 117 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 PITPNAQ00169 270 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 CDNFQ49AH0 187 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 OR5T1Q8NG75 326 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 OR6Q1Q8NGQ2 317 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 Q9H521 79 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 STUB1Q9UNE7 303 aa17.5■□□□□ 0.39
CHD4-214ENST00000545942 A0A0G2JLM5 398 aa17.49■□□□□ 0.39
CHD4-214ENST00000545942 C13orf42A0A1B0GVH6 325 aa17.49■□□□□ 0.39
CHD4-214ENST00000545942 SRRM4A7MD48 611 aaKnown RBP17.49■□□□□ 0.39
CHD4-214ENST00000545942 DUTP33316 252 aaKnown RBP17.49■□□□□ 0.39
CHD4-214ENST00000545942 TPRA1Q86W33 373 aa17.49■□□□□ 0.39
CHD4-214ENST00000545942 DDB2Q92466 427 aa17.49■□□□□ 0.39
CHD4-214ENST00000545942 SCGNO76038 276 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 SPNP16150 400 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 HACD4Q5VWC8 232 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 OR4C12Q96R67 309 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 ASCL2Q99929 193 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 ST6GALNAC5Q9BVH7 336 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 YTHDF1Q9BYJ9 559 aaKnown RBP17.48■□□□□ 0.39
CHD4-214ENST00000545942 RANGRFQ9HD47 186 aaPredicted RBP17.48■□□□□ 0.39
CHD4-214ENST00000545942 SSR3Q9UNL2 185 aa17.48■□□□□ 0.39
CHD4-214ENST00000545942 CRYZL1O95825 349 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 CTXN2P0C2S0 81 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 UBE2KP61086 200 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 VMA21Q3ZAQ7 101 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 TEX45Q8NA69 505 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 DCSTAMPQ9H295 470 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 DAPK2Q9UIK4 370 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 LINC00473A8K010 186 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 BRI3O95415 125 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 GP9P14770 177 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 ZP3P21754 424 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 OSR1Q8TAX0 266 aaPredicted RBP17.47■□□□□ 0.39
CHD4-214ENST00000545942 ELOVL1Q9BW60 279 aa17.47■□□□□ 0.39
CHD4-214ENST00000545942 PRSS8Q16651 343 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 MRGPRG-AS1Q2M3A8 158 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 SFXN4Q6P4A7 337 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 ZNF645Q8N7E2 425 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 NUDCD2Q8WVJ2 157 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 PHB2Q99623 299 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 TINAGL1Q9GZM7 467 aaPredicted RBP17.46■□□□□ 0.38
CHD4-214ENST00000545942 COA4Q9NYJ1 87 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 RRP15Q9Y3B9 282 aaKnown RBP17.46■□□□□ 0.38
CHD4-214ENST00000545942 OR2W1Q9Y3N9 320 aa17.46■□□□□ 0.38
CHD4-214ENST00000545942 KMT2CQ8NEZ4 4911 aaKnown RBP17.45■□□□□ 0.38
CHD4-214ENST00000545942 TMEM235A6NFC5 223 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 J3QRK9 145 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 AADACP22760 399 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 GNG2P59768 71 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 TNXAQ16473 311 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 IDO2Q6ZQW0 420 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 LGALS14Q8TCE9 139 aa17.45■□□□□ 0.38
CHD4-214ENST00000545942 ANKRD34BA5PLL1 514 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 MSGN1A6NI15 193 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 SLC22A5O76082 557 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 HLA-DQB1P01920 261 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 CD36P16671 472 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 NFYAP23511 347 aaPredicted RBP17.44■□□□□ 0.38
CHD4-214ENST00000545942 CNIH2Q6PI25 160 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 ZNF773Q6PK81 442 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 OR51E2Q9H255 320 aa17.44■□□□□ 0.38
CHD4-214ENST00000545942 SDC2P34741 201 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 KCTD9Q7L273 389 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 SRSF12Q8WXF0 261 aaKnown RBP17.43■□□□□ 0.38
CHD4-214ENST00000545942 ACOT12Q8WYK0 555 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 USMG5Q96IX5 58 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 RSRP1Q9BUV0 290 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 RHBDL2Q9NX52 303 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 PRELID3BQ9Y3B1 194 aa17.43■□□□□ 0.38
CHD4-214ENST00000545942 TENM3Q9P273 2699 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 SORL1Q92673 2214 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 CREBL2O60519 120 aaPredicted RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 FCGR3BO75015 233 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 OR9G9P0C7N8 305 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 APELAP0DMC3 54 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 KLF5Q13887 457 aaPredicted RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 ZNF343Q6P1L6 599 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 ANKRD13BQ86YJ7 626 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 ADAD2Q8NCV1 583 aaKnown RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 DCUN1D5Q9BTE7 237 aa17.42■□□□□ 0.38
CHD4-214ENST00000545942 ZNF430Q9H8G1 570 aaPredicted RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 MRPS7Q9Y2R9 242 aaKnown RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 RBMX2Q9Y388 322 aaKnown RBP17.42■□□□□ 0.38
CHD4-214ENST00000545942 MPPED1O15442 326 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 SSX5O60225 188 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 ACTL6BO94805 426 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 IGLV1-51P01701 117 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 SAA1P0DJI8 122 aaPredicted RBP17.41■□□□□ 0.38
CHD4-214ENST00000545942 SCAND1P57086 179 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 DEFA5Q01523 94 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 MXD1Q05195 221 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 DYRK1AQ13627 763 aa17.41■□□□□ 0.38
CHD4-214ENST00000545942 CDK10Q15131 360 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms