RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 VKORC1L1Q8N0U8 176 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 LINC00469Q8N7U9 141 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 ACTR3CQ9C0K3 210 aaPredicted RBP13.18□□□□□ -0.3
LDLR-204ENST00000545707 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 MARCH11A6NNE9 402 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 TIMM8AO60220 97 aaPredicted RBP13.18□□□□□ -0.3
LDLR-204ENST00000545707 COX5AP20674 150 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 ZBTB34Q8NCN2 500 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 AGMATQ9BSE5 352 aa13.18□□□□□ -0.3
LDLR-204ENST00000545707 TMEM210A6NLX4 147 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 PROP1O75360 226 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
LDLR-204ENST00000545707 FOXF2Q12947 444 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 ATP6V1FQ16864 119 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 J3QW42 95 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 RAB29O14966 203 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 GYPAP02724 150 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 EDDM3BP56851 147 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
LDLR-204ENST00000545707 SVILO95425 2214 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 C15orf62A8K5M9 175 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 CHRNA7P36544 502 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 DEFA6Q01524 100 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 ZNF66Q6ZN08 573 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 Q6ZT83 130 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 DERL1Q9BUN8 251 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 CXXC4Q9H2H0 198 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 PITPNC1Q9UKF7 332 aa13.16□□□□□ -0.3
LDLR-204ENST00000545707 PGPEP1LA6NFU8 196 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 FCGR3BO75015 233 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
LDLR-204ENST00000545707 PMS2P11Q13670 270 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 INO80CQ6PI98 192 aaPredicted RBP13.15□□□□□ -0.3
LDLR-204ENST00000545707 Q8N7P7 452 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 OR5B12Q96R08 314 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 TMEM204Q9BSN7 226 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 PATZ1Q9HBE1 687 aaKnown RBP13.15□□□□□ -0.3
LDLR-204ENST00000545707 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
LDLR-204ENST00000545707 PPP5D1E7EU14 171 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 CECR9P0C854 216 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 ATP5G3P48201 142 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 TNFSF10P50591 281 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 CCL11P51671 97 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 DEFB123Q8N688 67 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 TMEM178AQ8NBL3 297 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 SDSLQ96GA7 329 aa13.15□□□□□ -0.3
LDLR-204ENST00000545707 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
LDLR-204ENST00000545707 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 MBP02144 154 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 AMBPP02760 352 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 SP9P0CG40 484 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
LDLR-204ENST00000545707 UTF1Q5T230 341 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 CST9LP1Q5W188 147 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
LDLR-204ENST00000545707 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 NKX2-8O15522 239 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 SOX15O60248 233 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
LDLR-204ENST00000545707 RPL39P5Q59GN2 51 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 TAAR6Q96RI8 345 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 FUT9Q9Y231 359 aa13.14□□□□□ -0.31
LDLR-204ENST00000545707 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 TGOLN2O43493 480 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 IGKV3-15P01624 115 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 HOXC12P31275 282 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 Q8TCH9 128 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 C14orf144Q96I85 54 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 MEGF10Q96KG7 1140 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
LDLR-204ENST00000545707 MANBALQ9NQG1 85 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 CADP27708 2225 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 RRHO14718 337 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 HRASP01112 189 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 IFNA10P01566 189 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 CD1BP29016 333 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 GPR12P47775 334 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 GNB2P62879 340 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 VWC2Q2TAL6 325 aa13.13□□□□□ -0.31
LDLR-204ENST00000545707 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms