RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SMIM31A0A1B0GVY4 71 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 XRCC3O43542 346 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 PROP1O75360 226 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 IGF1P05019 195 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ELANEP08246 267 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 RRASP10301 218 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 CNTFRP26992 372 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 CBX5P45973 191 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 LGALS7P47929 136 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 THBS3P49746 956 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 LUMP51884 338 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ARPC4P59998 168 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 VBP1P61758 197 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 RPL23AP62750 156 aaKnown RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 DEFA6Q01524 100 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 TMEM267Q0VDI3 215 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 RTL8BQ17RB0 113 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 CXorf66Q5JRM2 361 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 UBE2NLQ5JXB2 153 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF660Q6AZW8 331 aaPredicted RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ANKRD13BQ86YJ7 626 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 BEST4Q8NFU0 473 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 SLC25A46Q96AG3 418 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 SLC25A38Q96DW6 304 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 RBMXL1Q96E39 390 aaKnown RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ADTRPQ96IZ2 230 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 HSPB9Q9BQS6 159 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 MRPS26Q9BYN8 205 aaKnown RBP5.79□□□□□ -1.48
CPSF7-224ENST00000544990 OR51J1Q9H342 316 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 FBXL15Q9H469 300 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 AUNIPQ9H7T9 357 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 SLC35D1Q9NTN3 355 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 SDHAF2Q9NX18 166 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 ANXA10Q9UJ72 324 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 OR2W1Q9Y3N9 320 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 MGAM2Q2M2H8 2515 aa5.79□□□□□ -1.48
CPSF7-224ENST00000544990 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 IGHV7-81A0A0B4J1V7 117 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 DBX1A6NMT0 343 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 SSX5O60225 188 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 SPDEFO95238 335 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 IGHG4P01861 327 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 HLA-DQB1P01920 261 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 NFYAP23511 347 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-224ENST00000544990 RORCP51449 518 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 RAP2BP61225 183 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 NCS1P62166 190 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 FOXE3Q13461 319 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 PSG5Q15238 335 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 TMEM69Q5SWH9 247 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 MZT2AQ6P582 158 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 TMEM65Q6PI78 240 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 HOGA1Q86XE5 327 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF645Q8N7E2 425 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 SAMD12Q8N8I0 201 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 ZNF383Q8NA42 475 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 ABHD5Q8WTS1 349 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 ACOT12Q8WYK0 555 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 CMTM3Q96MX0 182 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 IFT46Q9NQC8 304 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 PARP11Q9NR21 331 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 NECAP2Q9NVZ3 263 aa5.78□□□□□ -1.48
CPSF7-224ENST00000544990 METTL1Q9UBP6 276 aaKnown RBP5.78□□□□□ -1.48
CPSF7-224ENST00000544990 TRAV41A0A0B4J266 112 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 J3QRK9 145 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 ATP6V0E1O15342 81 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 DUS4LO95620 317 aaKnown RBP5.77□□□□□ -1.49
CPSF7-224ENST00000544990 APOA1P02647 267 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 IGKV1-16P04430 117 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 SMIM18P0DKX4 95 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 CD40LGP29965 261 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 PPIFP30405 207 aaKnown RBP5.77□□□□□ -1.49
CPSF7-224ENST00000544990 DUTP33316 252 aaKnown RBP5.77□□□□□ -1.49
CPSF7-224ENST00000544990 MYCNOSP40205 109 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 CDX1P47902 265 aaPredicted RBP5.77□□□□□ -1.49
CPSF7-224ENST00000544990 LINC00205P59089 165 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 CX3CL1P78423 397 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 CFHR3Q02985 330 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 GPR107Q5VW38 600 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF562Q6V9R5 426 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 GPR141Q7Z602 305 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 C1QL4Q86Z23 238 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF695Q8IW36 515 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 GVQW1Q8N7I0 195 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 TCTEX1D1Q8N7M0 179 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 RNF152Q8N8N0 203 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 OR5AP2Q8NGF4 316 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 AP3S1Q92572 193 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 HARBI1Q96MB7 349 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 CLCC1Q96S66 551 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 COMMD3Q9UBI1 195 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 PRELID3BQ9Y3B1 194 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 WSB1Q9Y6I7 421 aa5.77□□□□□ -1.49
CPSF7-224ENST00000544990 A0A1W2PN81 502 aa5.76□□□□□ -1.49
CPSF7-224ENST00000544990 G3V318 75 aa5.76□□□□□ -1.49
CPSF7-224ENST00000544990 G3V4G9 280 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms