RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	TEX45	Q8NA69	505 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	OR11H1	Q8NG94	326 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	OR1N2	Q8NGR9	330 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	HARBI1	Q96MB7	349 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	TMEM68	Q96MH6	324 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	AUNIP	Q9H7T9	357 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	TPSG1	Q9NRR2	321 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	SRRM4	A7MD48	611 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	LINC00473	A8K010	186 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432		H3BUA1	57 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432		K7EIL1	84 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	ARPC1B	O15143	372 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	SHOX	O15266	292 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	XRCC3	O43542	346 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	BRI3	O95415	125 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	CD40LG	P29965	261 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	CBX5	P45973	191 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	UBE2K	P61086	200 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	SSBP2	P81877	361 aa	Predicted RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	ZNF616	Q08AN1	781 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	LFNG	Q8NES3	379 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	BEST4	Q8NFU0	473 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	OSR1	Q8TAX0	266 aa	Predicted RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	ABHD5	Q8WTS1	349 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	KCTD12	Q96CX2	325 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	S100A16	Q96FQ6	103 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	FAM103A1	Q9BTL3	118 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	SLA2	Q9H6Q3	261 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	RBMX2	Q9Y388	322 aa	Known RBP	10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	A3GALT2	U3KPV4	340 aa		10.8	□□□□□ -0.68
VAMP1-208	ENST00000544432	IGKV1D-13	A0A0B4J2D9	117 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	CNIH1	O95406	144 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	IGLV2-14	P01704	120 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	IGKV1-13	P0DP09	117 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	HOXD3	P31249	432 aa	Predicted RBP	10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	TGFBR1	P36897	503 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	RAB25	P57735	213 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	GNB1	P62873	340 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	MSMO1	Q15800	293 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	VMA21	Q3ZAQ7	101 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	C9orf66	Q5T8R8	295 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	OVCH2	Q7RTZ1	564 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	SLC25A46	Q96AG3	418 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	HSD17B10	Q99714	261 aa	Known RBP	10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	PRELID3B	Q9Y3B1	194 aa		10.79	□□□□□ -0.68
VAMP1-208	ENST00000544432	RAMP3	O60896	148 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	CRYZL1	O95825	349 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	LGALS1	P09382	135 aa	Known RBP	10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	INSL3	P51460	131 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	ARPC4	P59998	168 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	DGCR2	P98153	550 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	PJVK	Q0ZLH3	352 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	MRGPRG-AS1	Q2M3A8	158 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	UBE2NL	Q5JXB2	153 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	ASPHD1	Q5U4P2	390 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	GVQW1	Q8N7I0	195 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	RHOV	Q96L33	236 aa		10.78	□□□□□ -0.68
VAMP1-208	ENST00000544432	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432		J3QRK9	145 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	LSM3	P62310	102 aa	Known RBP	10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	PRSS8	Q16651	343 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	ZNF66	Q6ZN08	573 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	POC5	Q8NA72	575 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	ZBTB34	Q8NCN2	500 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	OR13F1	Q8NGS4	319 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	GRPEL2	Q8TAA5	225 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	GIMAP1	Q8WWP7	306 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	CMTM3	Q96MX0	182 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	OR5B12	Q96R08	314 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	FUNDC2	Q9BWH2	189 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	SCOC	Q9UIL1	159 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	MRPS7	Q9Y2R9	242 aa	Known RBP	10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	TNC	P24821	2201 aa		10.77	□□□□□ -0.69
VAMP1-208	ENST00000544432	SEC14L6	B5MCN3	397 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	LINC01619	G3V211	115 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	CREBL2	O60519	120 aa	Predicted RBP	10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	FCGR3B	O75015	233 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	TRGV3	P03979	118 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	HSPB1	P04792	205 aa	Known RBP	10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	AADAC	P22760	399 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	FCGR2C	P31995	323 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	RPL30	P62888	115 aa	Known RBP	10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	DCTN2	Q13561	401 aa	Known RBP	10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	CDK10	Q15131	360 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	KCTD9	Q7L273	389 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	MFSD4A	Q8N468	514 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	SAMD12	Q8N8I0	201 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	OR5AP2	Q8NGF4	316 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	DCUN1D4	Q92564	292 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	SNAPC3	Q92966	411 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	MS4A10	Q96PG2	267 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432	ANAPC10	Q9UM13	185 aa		10.76	□□□□□ -0.69
VAMP1-208	ENST00000544432		A0A0G2JLM5	398 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	PPY	P01298	95 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	PTHLH	P12272	177 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	NAT1	P18440	290 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	KIR2DS2	P43631	304 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	TPPP2	P59282	170 aa		10.75	□□□□□ -0.69
VAMP1-208	ENST00000544432	TMEM69	Q5SWH9	247 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms