RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 IZUMO4Q1ZYL8 232 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 Q6ZRM9 215 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 OR5AN1Q8NGI8 311 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 PCGF1Q9BSM1 259 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 ASH1LQ9NR48 2969 aaKnown RBP24.69■■□□□ 1.54
CCM2-219ENST00000544363 A0A096LNT2 108 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 ODF3BA8MYP8 253 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 PITX3O75364 302 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 CRYZL1O95825 349 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 APOA2P02652 100 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 PET100P0DJ07 73 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 HOXB4P17483 251 aaPredicted RBP24.68■■□□□ 1.54
CCM2-219ENST00000544363 TMEM65Q6PI78 240 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 ZFP57Q9NU63 452 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 CACNG5Q9UF02 275 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 MARCH11A6NNE9 402 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 H0YJW9 148 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 LY6LH3BQJ8 138 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 RRASP10301 218 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 Q5PR19 223 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 DHRS7BQ6IAN0 325 aaPredicted RBP24.68■■□□□ 1.54
CCM2-219ENST00000544363 PRSS54Q6PEW0 395 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 ZNF546Q86UE3 836 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 TBX15Q96SF7 602 aa24.68■■□□□ 1.54
CCM2-219ENST00000544363 POLQO75417 2590 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 ABCA12Q86UK0 2595 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 RNASEK-C17orf49H0YIS7 233 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 LYL1P12980 280 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 NQO2P16083 231 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 PAX8Q06710 450 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 LGALSLQ3ZCW2 172 aaPredicted RBP24.67■■□□□ 1.54
CCM2-219ENST00000544363 H2BFWTQ7Z2G1 175 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 FOXRED2Q8IWF2 684 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 OR1S1Q8NH92 325 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 BOLA1Q9Y3E2 137 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 LSM5Q9Y4Y9 91 aaKnown RBP24.67■■□□□ 1.54
CCM2-219ENST00000544363 HSPB11Q9Y547 144 aa24.67■■□□□ 1.54
CCM2-219ENST00000544363 NBPF19A0A087WUL8 3843 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 ARPC5O15511 151 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 SNAPC5O75971 98 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 GAPDHP04406 335 aaKnown RBP24.66■■□□□ 1.54
CCM2-219ENST00000544363 HTR1DP28221 377 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 NKX2-1P43699 371 aaPredicted RBP24.66■■□□□ 1.54
CCM2-219ENST00000544363 PRSS57Q6UWY2 283 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 C1orf159Q96HA4 380 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 OR5AC2Q9NZP5 309 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 VPS13CQ709C8 3753 aa24.66■■□□□ 1.54
CCM2-219ENST00000544363 K7EPK0 472 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 ST8SIA3O43173 380 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 RLN2P04090 185 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 FAM71E2Q8N5Q1 922 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 RPEQ96AT9 228 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 PLSCR3Q9NRY6 295 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 COA4Q9NYJ1 87 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 DPM3Q9P2X0 92 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 POMT1Q9Y6A1 747 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 GCN1Q92616 2671 aaKnown RBP24.65■■□□□ 1.54
CCM2-219ENST00000544363 ABCA2Q9BZC7 2435 aa24.65■■□□□ 1.54
CCM2-219ENST00000544363 LEUTXA8MZ59 168 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 TXNL1O43396 289 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 DEDDO75618 318 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 MSMBP08118 114 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 ERVK-16P61578 105 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 ID3Q02535 119 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 CXorf66Q5JRM2 361 aaPredicted RBP24.64■■□□□ 1.54
CCM2-219ENST00000544363 PDZD9Q8IXQ8 264 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 DMBX1Q8NFW5 382 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 TNFSF18Q9UNG2 199 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 WNK2Q9Y3S1 2297 aa24.64■■□□□ 1.54
CCM2-219ENST00000544363 APCP25054 2843 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 B4DSR2 109 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 IGKV1-16P04430 117 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 LDLRAD2Q5SZI1 272 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 DCUN1D4Q92564 292 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 CSMD2Q7Z408 3487 aa24.64■■□□□ 1.53
CCM2-219ENST00000544363 H7C2Y5 167 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 HRASP01112 189 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 CXCL2P19875 107 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 MC5RP33032 325 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 MIDNQ504T8 468 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 TPTE2P1Q5T6R2 138 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 PDPNQ86YL7 162 aa24.63■■□□□ 1.53
CCM2-219ENST00000544363 IGHV1-3A0A0C4DH29 117 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 CEACAM3P40198 252 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 LOXL1Q08397 574 aaPredicted RBP24.62■■□□□ 1.53
CCM2-219ENST00000544363 SSX9Q7RTT3 188 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 LHX4Q969G2 390 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 MFFQ9GZY8 342 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 WASHC3Q9Y3C0 194 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 NAV2Q8IVL1 2488 aa24.62■■□□□ 1.53
CCM2-219ENST00000544363 FAM90A9PA6NNJ1 464 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 RAB13P51153 203 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 UBE2E1P51965 193 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 POU2AF1Q16633 256 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 VKORC1L1Q8N0U8 176 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 RBMXL1Q96E39 390 aaKnown RBP24.61■■□□□ 1.53
CCM2-219ENST00000544363 A0A1W2PRD5 423 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 A0A1W2PRF3 423 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 A0A1W2PRM7 423 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 L7N2F9 121 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms