RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 SPRY3O43610 288 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 S100A8P05109 93 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 RAB7AP51149 207 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 SPCS3P61009 180 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 ELOBQ15370 118 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 LTC4SQ16873 150 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.68□□□□□ -0.06
SCARB1-208ENST00000544327 C12orf57Q99622 126 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 NPCDR1Q9BY65 106 aa14.68□□□□□ -0.06
SCARB1-208ENST00000544327 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
SCARB1-208ENST00000544327 USF3Q68DE3 2245 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 M0R1X1 148 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 SOX15O60248 233 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 FCGR3BO75015 233 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 EIF3GO75821 320 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB1-208ENST00000544327 C17orf58Q2M2W7 97 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 ZNRF1Q8ND25 227 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 Q8TCH9 128 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 DDB2Q92466 427 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 DIRC2Q96SL1 478 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 SDF2L1Q9HCN8 221 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 IL19Q9UHD0 177 aa14.67□□□□□ -0.06
SCARB1-208ENST00000544327 RBMXL2O75526 392 aaKnown RBP14.66□□□□□ -0.06
SCARB1-208ENST00000544327 ZNF134P52741 427 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 RPP30P78346 268 aaKnown RBP14.66□□□□□ -0.06
SCARB1-208ENST00000544327 TFF3Q07654 80 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 STUMQ69YW2 141 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 OR10G9Q8NGN4 311 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 OR10G7Q8NGN6 311 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 ACTR3CQ9C0K3 210 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-208ENST00000544327 GFOD1Q9NXC2 390 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 RNF7Q9UBF6 113 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 URB1O60287 2271 aaKnown RBP14.66□□□□□ -0.06
SCARB1-208ENST00000544327 A8MXE2 369 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 C17orf112F2Z3M2 114 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 CYB5R3P00387 301 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-208ENST00000544327 RND2P52198 227 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 SELENOVP59797 346 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 FFAR4Q5NUL3 377 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 NUP37Q8NFH4 326 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 Q8WTZ3 238 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 ZNF251Q9BRH9 671 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 FAM234AQ9H0X4 552 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 MANBALQ9NQG1 85 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 WDR83OSQ9Y284 106 aa14.66□□□□□ -0.06
SCARB1-208ENST00000544327 AP4M1O00189 453 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 NQO2P16083 231 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 VDAC2P45880 294 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-208ENST00000544327 EDDM3BP56851 147 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 CD81P60033 236 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 ERVK-16P61578 105 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 MEF2BQ02080 365 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-208ENST00000544327 TMEM30BQ3MIR4 351 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 RPL39P5Q59GN2 51 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 PRAMEF5Q5TYX0 476 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 WDR25Q64LD2 544 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-208ENST00000544327 VHLLQ6RSH7 139 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 ZNF709Q8N972 641 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 S1PR3Q99500 378 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 GGACTQ9BVM4 153 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 LINC00574Q9H8X3 128 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 GCM1Q9NP62 436 aa14.65□□□□□ -0.06
SCARB1-208ENST00000544327 KBTBD11-OT1A0A1B0GTJ5 212 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 TMEM250H0YL14 139 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 K7EM74 188 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 IGHV1-46P01743 117 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 CD40P25942 277 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 OR2B8PP59922 312 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 TNFAIP6P98066 277 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-208ENST00000544327 RELBQ01201 579 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 TMEM249Q2WGJ8 235 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 ALKBH2Q6NS38 261 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 Q8N7P7 452 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 OR4A16Q8NH70 328 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 MPDU1O75352 247 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 CXCL1P09341 107 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 SMIM6P0DI80 62 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 PSMB3P49720 205 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 TMPRSS3P57727 454 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 ERVFRD-1P60508 538 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 FABP9Q0Z7S8 132 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 SPINK9Q5DT21 86 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 PRSS33Q8NF86 280 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 OR4S2Q8NH73 311 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 CTDSP1Q9GZU7 261 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 SLC25A22Q9H936 323 aa14.64□□□□□ -0.07
SCARB1-208ENST00000544327 TRGV8A0A0C4DH27 118 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 SEC14L6B5MCN3 397 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 ATXN7O15265 892 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-208ENST00000544327 SLC31A2O15432 143 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 TNFSF4P23510 183 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 RPS10P46783 165 aaKnown RBP14.63□□□□□ -0.07
SCARB1-208ENST00000544327 ACOT6Q3I5F7 207 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-208ENST00000544327 ZNF343Q6P1L6 599 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 CYP2G1PQ6ZSU1 146 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 CORO2AQ92828 525 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 GAFA1Q96PS6 74 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 TCEAL7Q9BRU2 100 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 NAT8Q9UHE5 227 aa14.63□□□□□ -0.07
SCARB1-208ENST00000544327 CACNA1DQ01668 2161 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms