RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 IGHV4-30-4P0DP06 118 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 HIST1H1DP16402 221 aaKnown RBP14.24□□□□□ -0.13
LTBR-211ENST00000543190 GADD45AP24522 165 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 MECP2P51608 486 aaKnown RBP14.24□□□□□ -0.13
LTBR-211ENST00000543190 UBE2KP61086 200 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 CBX3Q13185 183 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 RTL8BQ17RB0 113 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 IGSF11Q5DX21 431 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 OVCH2Q7RTZ1 564 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 ANKRD13BQ86YJ7 626 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 OSR1Q8TAX0 266 aaPredicted RBP14.24□□□□□ -0.13
LTBR-211ENST00000543190 C5orf30Q96GV9 206 aa14.24□□□□□ -0.13
LTBR-211ENST00000543190 PDCD5O14737 125 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 OR2A4O95047 310 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 GSTT2P0CG29 244 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 GSTT2BP0CG30 244 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 DUTP33316 252 aaKnown RBP14.23□□□□□ -0.13
LTBR-211ENST00000543190 DYRK1AQ13627 763 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 FAM209BQ5JX69 171 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 H1FOOQ8IZA3 346 aaPredicted RBP14.23□□□□□ -0.13
LTBR-211ENST00000543190 ADAD2Q8NCV1 583 aaKnown RBP14.23□□□□□ -0.13
LTBR-211ENST00000543190 EDA2RQ9HAV5 297 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 NDUFB11Q9NX14 153 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 PEF1Q9UBV8 284 aaKnown RBP14.23□□□□□ -0.13
LTBR-211ENST00000543190 LYSTQ99698 3801 aa14.23□□□□□ -0.13
LTBR-211ENST00000543190 TRBV9A0A0B4J1U6 114 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 SHOXO15266 292 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 LYL1P12980 280 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 DTYMKP23919 212 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 PLA2G7Q13093 441 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 ZNF367Q7RTV3 350 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 OR5T1Q8NG75 326 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 OR2K2Q8NGT1 345 aa14.22□□□□□ -0.13
LTBR-211ENST00000543190 TRDV1A0A1B0GX56 115 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 SHISA3A0PJX4 238 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 METTL21EPA6NDL7 271 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 FAM223BA6NKX1 122 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 BET1O15155 118 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 PRSS8Q16651 343 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 SGPP2Q8IWX5 399 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 ZNF355PQ9NSJ1 428 aa14.21□□□□□ -0.13
LTBR-211ENST00000543190 AIREO43918 545 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 CREBL2O60519 120 aaPredicted RBP14.2□□□□□ -0.14
LTBR-211ENST00000543190 MRPS14O60783 128 aaKnown RBP14.2□□□□□ -0.14
LTBR-211ENST00000543190 SLC22A5O76082 557 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 CSN3P07498 182 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 CTXN2P0C2S0 81 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 OR9G9P0C7N8 305 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 HSPA13P48723 471 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 TATDN3Q17R31 274 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 KLK9Q2XQG4 91 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 VMA21Q3ZAQ7 101 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 LCN12Q6JVE5 192 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 LAX1Q8IWV1 398 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 Q8N402 240 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 BVESQ8NE79 360 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 SNAPC3Q92966 411 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 DCSTAMPQ9H295 470 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 KLK9Q9UKQ9 250 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 BLOC1S6Q9UL45 172 aa14.2□□□□□ -0.14
LTBR-211ENST00000543190 LINC00473A8K010 186 aa14.19□□□□□ -0.14
LTBR-211ENST00000543190 GNB3P16520 340 aa14.19□□□□□ -0.14
LTBR-211ENST00000543190 HES5Q5TA89 166 aa14.19□□□□□ -0.14
LTBR-211ENST00000543190 SRSF12Q8WXF0 261 aaKnown RBP14.19□□□□□ -0.14
LTBR-211ENST00000543190 MSGN1A6NI15 193 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 RBMXL2O75526 392 aaKnown RBP14.18□□□□□ -0.14
LTBR-211ENST00000543190 HLA-DQB1P01920 261 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 RAB3BP20337 219 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 MAP2K4P45985 399 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 SYNJ2BPP57105 145 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 OR10A3P58181 314 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 CDK10Q15131 360 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 TTC9CQ8N5M4 171 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 SPIN2AQ99865 258 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 SPIN2BQ9BPZ2 258 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 SPATA25Q9BR10 227 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 GINS4Q9BRT9 223 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 CCDC90BQ9GZT6 254 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 VCX3BQ9H321 246 aa14.18□□□□□ -0.14
LTBR-211ENST00000543190 ZNF230Q9UIE0 474 aaPredicted RBP14.18□□□□□ -0.14
LTBR-211ENST00000543190 SACSQ9NZJ4 4579 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 LCE6AA0A183 80 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 SCGNO76038 276 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 FGF9P31371 208 aaPredicted RBP14.17□□□□□ -0.14
LTBR-211ENST00000543190 LINC00322Q6ZN03 302 aaPredicted RBP14.17□□□□□ -0.14
LTBR-211ENST00000543190 NR2C2APQ86WQ0 139 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 MMD2Q8IY49 270 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 ISOC1Q96CN7 298 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 RSRP1Q9BUV0 290 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 COA4Q9NYJ1 87 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 PEMTQ9UBM1 199 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 OR2W1Q9Y3N9 320 aa14.17□□□□□ -0.14
LTBR-211ENST00000543190 IGKV1D-8A0A087WSZ0 117 aa14.16□□□□□ -0.14
LTBR-211ENST00000543190 CRYZL1O95825 349 aa14.16□□□□□ -0.14
LTBR-211ENST00000543190 TRBV12-3P01733 135 aa14.16□□□□□ -0.14
LTBR-211ENST00000543190 MYL9P24844 172 aa14.16□□□□□ -0.14
LTBR-211ENST00000543190 HAGHQ16775 308 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms