RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 RITA1Q96K30 269 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 ZNF436Q9C0F3 470 aaPredicted RBP13.91□□□□□ -0.18
GTDC1-219ENST00000542155 DPM3Q9P2X0 92 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 C13orf42A0A1B0GVH6 325 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 THBS3P49746 956 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 TPTE2P1Q5T6R2 138 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 VKORC1L1Q8N0U8 176 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
GTDC1-219ENST00000542155 RBPMSQ93062 196 aaKnown RBP13.91□□□□□ -0.18
GTDC1-219ENST00000542155 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 IGHV1-3A0A0C4DH29 117 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 A0A1W2PPI3 338 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 SSX2Q16385 188 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 Q6ZRM9 215 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 RPEQ96AT9 228 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 RAB18Q9NP72 206 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 KRASP01116 189 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 SAA4P35542 130 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 G6PCP35575 357 aa13.9□□□□□ -0.18
GTDC1-219ENST00000542155 SONP18583 2426 aaKnown RBP13.9□□□□□ -0.18
GTDC1-219ENST00000542155 MXRA5Q9NR99 2828 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 SRRM4A7MD48 611 aaKnown RBP13.89□□□□□ -0.19
GTDC1-219ENST00000542155 LEUTXA8MZ59 168 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 OR2A4O95047 310 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 CRYZL1O95825 349 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 FAM71F2Q6NXP2 309 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 OR2A7Q96R45 310 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 TNCP24821 2201 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 CD24P25063 80 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 IL3RAP26951 378 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 NMSQ5H8A3 153 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 PRELID3BQ9Y3B1 194 aa13.89□□□□□ -0.19
GTDC1-219ENST00000542155 AMMECR1Q9Y4X0 333 aaPredicted RBP13.89□□□□□ -0.19
GTDC1-219ENST00000542155 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 G3V3Q6 166 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 NPFFO15130 113 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 B3GALNT1O75752 331 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 GAPDHP04406 335 aaKnown RBP13.88□□□□□ -0.19
GTDC1-219ENST00000542155 GZMKP49863 264 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 MOB3BQ86TA1 216 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 GPR146Q96CH1 333 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 IGHV1-69DA0A0B4J2H0 117 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 IGHV1-69P01742 117 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 GATA3P23771 443 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 CYB5R2Q6BCY4 276 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 ADTRPQ96IZ2 230 aa13.88□□□□□ -0.19
GTDC1-219ENST00000542155 TIMM23O14925 209 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 LGALS4P56470 323 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 SSX9Q7RTT3 188 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 IL22RA2Q969J5 263 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 H7C2Y5 167 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 RAB13P51153 203 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 SRPXP78539 464 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 CFHR4Q92496 578 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 BOLA2-SMG1P6H3BVE0 249 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.19
GTDC1-219ENST00000542155 HPRT1P00492 218 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 P0C879 139 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 EPHA1P21709 976 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 VDAC1P21796 283 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 TCTEX1D1Q8N7M0 179 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 PLEKHA2Q9HB19 425 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 FAM212BQ9NTI7 297 aaPredicted RBP13.87□□□□□ -0.19
GTDC1-219ENST00000542155 GSKIPQ9P0R6 139 aa13.87□□□□□ -0.19
GTDC1-219ENST00000542155 IL15RAQ13261 267 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 IAH1Q2TAA2 248 aaPredicted RBP13.86□□□□□ -0.19
GTDC1-219ENST00000542155 MINOS1Q5TGZ0 78 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 GSG1LQ6UXU4 331 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 OR4S2Q8NH73 311 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 CD300LFQ8TDQ1 290 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 R3HDM4Q96D70 268 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 TMED3Q9Y3Q3 217 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 MINOS1-NBL1R4GNA1 71 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
GTDC1-219ENST00000542155 PDCD10Q9BUL8 212 aa13.86□□□□□ -0.19
GTDC1-219ENST00000542155 TRAV3A0A0B4J244 114 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 IFNA21P01568 189 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 CNTFRP26992 372 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 AKR1C2P52895 323 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 TBL2Q9Y4P3 447 aaKnown RBP13.85□□□□□ -0.19
GTDC1-219ENST00000542155 A0A0U1RQK1 487 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 CYSRT1A8MQ03 144 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 NXPH3O95157 252 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 GIPP09681 153 aaPredicted RBP13.85□□□□□ -0.19
GTDC1-219ENST00000542155 CEACAM3P40198 252 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 KIR2DS2P43631 304 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 TAGLNQ01995 201 aaKnown RBP13.85□□□□□ -0.19
GTDC1-219ENST00000542155 LRRC37A5PQ49AS3 106 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 MIDNQ504T8 468 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 WASHC3Q9Y3C0 194 aa13.85□□□□□ -0.19
GTDC1-219ENST00000542155 TET2Q6N021 2002 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms