RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PGAM2P15259 253 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 CNTFRP26992 372 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 S100GP29377 79 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 FAUP35544 74 aaKnown RBP12.32□□□□□ -0.44
DDB1-218ENST00000540784 LGALS7P47929 136 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 INPP1P49441 399 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 FAAP20Q6NZ36 180 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 SLC38A6Q8IZM9 456 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 Q8N2B8 174 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 OR4C16Q8NGL9 310 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 RSRP1Q9BUV0 290 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 MCUBQ9NWR8 336 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 HAX1O00165 279 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 SHOXO15266 292 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 CATR1Q13166 79 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 KLF9Q13886 244 aaPredicted RBP12.31□□□□□ -0.44
DDB1-218ENST00000540784 PSG5Q15238 335 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 BAK1Q16611 211 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 TMEM177Q53S58 311 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 OR2B11Q5JQS5 317 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 TRIQKQ629K1 86 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 ZNF57Q68EA5 555 aaPredicted RBP12.31□□□□□ -0.44
DDB1-218ENST00000540784 LIN54Q6MZP7 749 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 ZFAND1Q8TCF1 268 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 S100ZQ8WXG8 99 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 TRIM63Q969Q1 353 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 PRRT1Q99946 306 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
DDB1-218ENST00000540784 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
DDB1-218ENST00000540784 RRHO14718 337 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 CRYZL1O95825 349 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 ECI1P42126 302 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 PLGLAQ15195 96 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 C5orf64Q2M2E5 130 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 SPAG16Q8N0X2 631 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 C3orf56Q8N813 242 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 POC5Q8NA72 575 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 OR51S1Q8NGJ8 323 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
DDB1-218ENST00000540784 DEDD2Q8WXF8 326 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
DDB1-218ENST00000540784 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
DDB1-218ENST00000540784 NDUFA3O95167 84 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
DDB1-218ENST00000540784 PPP5CP53041 499 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 IDO2Q6ZQW0 420 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 OR51H1Q8NH63 302 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 CD300LFQ8TDQ1 290 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 ZNF486Q96H40 463 aaPredicted RBP12.29□□□□□ -0.44
DDB1-218ENST00000540784 HARBI1Q96MB7 349 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 FBXL15Q9H469 300 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
DDB1-218ENST00000540784 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
DDB1-218ENST00000540784 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
DDB1-218ENST00000540784 SLC25A17O43808 307 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 SPDEFO95238 335 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 IGHG2P01859 326 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 RLN1P04808 185 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 VSIG10L2P0DP72 767 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 PROK1P58294 105 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
DDB1-218ENST00000540784 SPATA3Q8NHX4 192 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 SCGB3A2Q96PL1 93 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 COL6A5A8TX70 2615 aa12.28□□□□□ -0.44
DDB1-218ENST00000540784 LINC00854A0A1B0GVQ3 168 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 FCN1O00602 326 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 MPPED1O15442 326 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDB1-218ENST00000540784 KCNAB3O43448 404 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 HRASP01112 189 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 IGLV2-23P01705 113 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 IL7P13232 177 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 PI3P19957 117 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 F2RP25116 425 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 ZNF846Q147U1 533 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 SURF2Q15527 256 aaPredicted RBP12.27□□□□□ -0.45
DDB1-218ENST00000540784 VMA21Q3ZAQ7 101 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 TBC1D26Q86UD7 250 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 FOXRED2Q8IWF2 684 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 TCTEX1D1Q8N7M0 179 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 TEX45Q8NA69 505 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 OR13C8Q8NGS7 320 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 CLCC1Q96S66 551 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
DDB1-218ENST00000540784 C14orf166Q9Y224 244 aaKnown RBP12.27□□□□□ -0.45
DDB1-218ENST00000540784 CENPXA8MT69 81 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms