RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SIRT7Q9NRC8 400 aa19.98■□□□□ 0.79
TTC3-225ENST00000540756 PIGBOS1A0A0B4J2F0 54 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 IGKV1-16P04430 117 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 PLA2G2AP14555 144 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 C8orf31Q8N9H6 132 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 PCNPQ8WW12 178 aaKnown RBP19.97■□□□□ 0.79
TTC3-225ENST00000540756 ST6GALNAC6Q969X2 333 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 NUP62P37198 522 aaPredicted RBP19.97■□□□□ 0.79
TTC3-225ENST00000540756 LMO4P61968 165 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 LCN2P80188 198 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 H2BFWTQ7Z2G1 175 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 ARPC5LQ9BPX5 153 aa19.97■□□□□ 0.79
TTC3-225ENST00000540756 ZNF471Q9BX82 626 aaPredicted RBP19.97■□□□□ 0.79
TTC3-225ENST00000540756 ABCA12Q86UK0 2595 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 HELZ2Q9BYK8 2649 aaKnown RBP19.96■□□□□ 0.79
TTC3-225ENST00000540756 A0A1W2PPH5 198 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 FAM24AA6NFZ4 105 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 RBFOX2O43251 390 aaKnown RBP eCLIP19.96■□□□□ 0.791e-12■■■□□ 17.5
TTC3-225ENST00000540756 OR9G9P0C7N8 305 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 PAX9P55771 341 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 ATP5J2P56134 94 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 ZC4H2Q9NQZ6 224 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 CYTL1Q9NRR1 136 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 ZFP57Q9NU63 452 aa19.96■□□□□ 0.79
TTC3-225ENST00000540756 PDLIM4P50479 330 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 ALKAL2Q6UX46 152 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 SLC51BQ86UW2 128 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 PERPQ96FX8 193 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 SMIM3Q9BZL3 60 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 ABCA2Q9BZC7 2435 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 TRAV3A0A0B4J244 114 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 NHLH2Q02577 135 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 ZNF767PQ75MW2 155 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 SLC7A5P1Q8MH63 180 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 OR4S2Q8NH73 311 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 MMP26Q9NRE1 261 aa19.95■□□□□ 0.78
TTC3-225ENST00000540756 TET2Q6N021 2002 aaPredicted RBP19.94■□□□□ 0.78
TTC3-225ENST00000540756 CELSR1Q9NYQ6 3014 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 WRBO00258 174 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 TOR1AO14656 332 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 IGLV1-47P01700 117 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 P2RY1P47900 373 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 KRTAP10-9P60411 292 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 PNKDQ8N490 385 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 ADTRPQ96IZ2 230 aa19.94■□□□□ 0.78
TTC3-225ENST00000540756 ANKRD17O75179 2603 aaKnown RBP19.94■□□□□ 0.78
TTC3-225ENST00000540756 H3BP45 60 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 IAPPP10997 89 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 HTR2BP41595 481 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 KIR2DS2P43631 304 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 CAV2P51636 162 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 OR2B8PP59922 312 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 ST8SIA2Q92186 375 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 CLEC7AQ9BXN2 247 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 SLC35D1Q9NTN3 355 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 COA4Q9NYJ1 87 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 IGSF23A1L1A6 192 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 ATG12O94817 140 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 RBP4P02753 201 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 TAGLNQ01995 201 aaKnown RBP19.93■□□□□ 0.78
TTC3-225ENST00000540756 KLRD1Q13241 179 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 SPINK9Q5DT21 86 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 PDZD9Q8IXQ8 264 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 OR2C3Q8N628 320 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 FAM168AQ92567 244 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 TNCP24821 2201 aa19.93■□□□□ 0.78
TTC3-225ENST00000540756 SRRM4A7MD48 611 aaKnown RBP19.92■□□□□ 0.78
TTC3-225ENST00000540756 NQO2P16083 231 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 HLA-DRB5Q30154 266 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 TMEM186Q96B77 213 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 FBXL17Q9UF56 701 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 CSMD1Q96PZ7 3565 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 H0YJW9 148 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 SYNGR2O43760 224 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 ZNF137PP52743 207 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 VAMP2P63027 116 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 LDLRAD2Q5SZI1 272 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 OR8H3Q8N146 312 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 NABP2Q9BQ15 211 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 QTRT1Q9BXR0 403 aaKnown RBP19.92■□□□□ 0.78
TTC3-225ENST00000540756 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.92■□□□□ 0.78
TTC3-225ENST00000540756 LYRM2Q9NU23 88 aaPredicted RBP19.92■□□□□ 0.78
TTC3-225ENST00000540756 TMEM140Q9NV12 185 aa19.92■□□□□ 0.78
TTC3-225ENST00000540756 GPR137BO60478 399 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 RBMXL2O75526 392 aaKnown RBP19.91■□□□□ 0.78
TTC3-225ENST00000540756 IFNA7P01567 189 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 PAX2Q02962 417 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 TNFRSF9Q07011 255 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 OR4P4Q8NGL7 312 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 C10orf105Q8TEF2 133 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 RHOVQ96L33 236 aa19.91■□□□□ 0.78
TTC3-225ENST00000540756 hCG_1809904A0A1W2PP81 198 aa19.9■□□□□ 0.78
TTC3-225ENST00000540756 A0A1W2PPE2 198 aa19.9■□□□□ 0.78
TTC3-225ENST00000540756 A0A1W2PR64 198 aa19.9■□□□□ 0.78
TTC3-225ENST00000540756 A0A1W2PRV1 198 aa19.9■□□□□ 0.78
TTC3-225ENST00000540756 PVALBP20472 110 aaPredicted RBP19.9■□□□□ 0.78
TTC3-225ENST00000540756 EWSR1Q01844 656 aaKnown RBP eCLIP19.9■□□□□ 0.787e-11■■■□□ 17.4
TTC3-225ENST00000540756 ZNF787Q6DD87 383 aa19.9■□□□□ 0.78
TTC3-225ENST00000540756 RPL7L1Q6DKI1 246 aaKnown RBP19.9■□□□□ 0.78
TTC3-225ENST00000540756 OR5AN1Q8NGI8 311 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms