RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 AK6Q9Y3D8 172 aaKnown RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 CSMD3Q7Z407 3707 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TRBV6-7A0A0A0MS04 114 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 A0A0B4J203 849 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 SRRM4A7MD48 611 aaKnown RBP9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 PTGES3LE9PB15 166 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 JTBO76095 146 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TRBV12-3P01733 135 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 CD3GP09693 182 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 PSMD7P51665 324 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 UBE2KP61086 200 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TPBGQ13641 420 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 IRF3Q14653 427 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 RCN1Q15293 331 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 MRGPRG-AS1Q2M3A8 158 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 VMA21Q3ZAQ7 101 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 FAM209BQ5JX69 171 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TMEM91Q6ZNR0 172 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 OR10J5Q8NHC4 309 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TMEM203Q969S6 136 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 FAM3DQ96BQ1 224 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 ADTRPQ96IZ2 230 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 CEPT1Q9Y6K0 416 aa9.11□□□□□ -0.95
CBX3P4-202ENST00000540428 TRBV9A0A0B4J1U6 114 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 BET1O15155 118 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 DENRO43583 198 aaKnown RBP9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 CREBL2O60519 120 aaPredicted RBP9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 FCGR3AP08637 254 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 PRSS8Q16651 343 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 C2orf76Q3KRA6 126 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 IGSF11Q5DX21 431 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 OSR1Q8TAX0 266 aaPredicted RBP9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 SRSF12Q8WXF0 261 aaKnown RBP9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 DDB2Q92466 427 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 C5orf30Q96GV9 206 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 HIPK2Q9H2X6 1198 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 VCXQ9H320 206 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 SLC2A8Q9NY64 477 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 RAB22AQ9UL26 194 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
CBX3P4-202ENST00000540428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 IZUMO1RA6ND01 250 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 BMPR1BO00238 502 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 RBMXL2O75526 392 aaKnown RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 TPPPO94811 219 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 GSTT2P0CG29 244 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 GSTT2BP0CG30 244 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 CLDN12P56749 244 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 CD81P60033 236 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 RPS25P62851 125 aaKnown RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 DEFA5Q01523 94 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 TNXAQ16473 311 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 RAB3CQ96E17 227 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 SPIN2AQ99865 258 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 SPIN2BQ9BPZ2 258 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 NEURL2Q9BR09 285 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 AKIP1Q9NQ31 210 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 ZNF230Q9UIE0 474 aaPredicted RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 V9GY05 133 aa9.09□□□□□ -0.95
CBX3P4-202ENST00000540428 TMEM272A0A1B0GTI8 110 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 MPPED1O15442 326 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 TUSC2O75896 110 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 CRYZL1O95825 349 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 GADD45AP24522 165 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 RHOGP84095 191 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 ATP5G2Q06055 141 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 MLLT11Q13015 90 aaPredicted RBP9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 EXOSC2Q13868 293 aaKnown RBP9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 CD300EQ496F6 205 aaPredicted RBP9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 Q6ZS49 121 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 OR10R2Q8NGX6 335 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 GINS4Q9BRT9 223 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 DUSP21Q9H596 190 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 PLEKHA3Q9HB20 300 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 TNCP24821 2201 aa9.08□□□□□ -0.96
CBX3P4-202ENST00000540428 ZNF785A8K8V0 405 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 MFNGO00587 321 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ACTL6BO94805 426 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 APELAP0DMC3 54 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 HIST1H1DP16402 221 aaKnown RBP9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 FABP5Q01469 135 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ZNF45Q02386 682 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 CDK10Q15131 360 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 IDO2Q6ZQW0 420 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 SLC25A42Q86VD7 318 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 MMD2Q8IY49 270 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms