RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CLCC1Q96S66 551 aa14.09□□□□□ -0.15
LTBR-207ENST00000539925 TSNAXQ99598 290 aaKnown RBP14.09□□□□□ -0.15
LTBR-207ENST00000539925 ATP5SQ99766 215 aa14.09□□□□□ -0.15
LTBR-207ENST00000539925 CHODLQ9H9P2 273 aa14.09□□□□□ -0.15
LTBR-207ENST00000539925 STRAPQ9Y3F4 350 aaKnown RBP14.09□□□□□ -0.15
LTBR-207ENST00000539925 RAB19A4D1S5 217 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 ZNF705EA8MWA4 302 aaPredicted RBP14.08□□□□□ -0.16
LTBR-207ENST00000539925 UMAD1C9J7I0 102 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 RBMXL2O75526 392 aaKnown RBP14.08□□□□□ -0.16
LTBR-207ENST00000539925 IFNA5P01569 189 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 DLX6P56179 175 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 RPP30P78346 268 aaKnown RBP14.08□□□□□ -0.16
LTBR-207ENST00000539925 IZUMO4Q1ZYL8 232 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 ZNF833PQ6ZTB9 187 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 OR5C1Q8NGR4 320 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 OR9G1Q8NH87 305 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 REG4Q9BYZ8 158 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 BARX1Q9HBU1 254 aaPredicted RBP14.08□□□□□ -0.16
LTBR-207ENST00000539925 WFDC1Q9HC57 220 aa14.08□□□□□ -0.16
LTBR-207ENST00000539925 KRBOX1C9JBD0 128 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 TRIM77I1YAP6 450 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 MMP23AO75900 390 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 APOA2P02652 100 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 FGF2P09038 288 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 CCL3L1P16619 93 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 GNG10P50151 68 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 PDLIM3Q53GG5 364 aaPredicted RBP14.07□□□□□ -0.16
LTBR-207ENST00000539925 OR4A16Q8NH70 328 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 LEAP2Q969E1 77 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 PARP11Q9NR21 331 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 TEX46H3BTG2 121 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 I3L521 148 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 FCN3O75636 299 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 SOD3P08294 240 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 DYNLT3P51808 116 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 ZNF137PP52743 207 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 SPCS3P61009 180 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 ATP6V1FQ16864 119 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 IL34Q6ZMJ4 242 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 ZNF429Q86V71 674 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 OR10X1Q8NGY0 326 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 PARD6GQ9BYG4 376 aaPredicted RBP14.07□□□□□ -0.16
LTBR-207ENST00000539925 RBKSQ9H477 322 aa14.07□□□□□ -0.16
LTBR-207ENST00000539925 ABCA4P78363 2273 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 A8MXK9 166 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 B8ZZF3 427 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 J3QR06 171 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 FBXO24O75426 580 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 CST7O76096 145 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 NXPH3O95157 252 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 IGHV3-7P01780 117 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 IGHV1-8P0DP01 117 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 CLINT1Q14677 625 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 ZNF841Q6ZN19 808 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 ZNF383Q8NA42 475 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 DTD1Q8TEA8 209 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 BSCL2Q96G97 398 aaPredicted RBP14.06□□□□□ -0.16
LTBR-207ENST00000539925 PCGF1Q9BSM1 259 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 MMP26Q9NRE1 261 aa14.06□□□□□ -0.16
LTBR-207ENST00000539925 A6NNC1 897 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 PPIHO43447 177 aaKnown RBP14.05□□□□□ -0.16
LTBR-207ENST00000539925 IAPPP10997 89 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 TMEM14EPQ6UXP3 125 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 ZNF295-AS1Q8N0V1 137 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 OSR1Q8TAX0 266 aaPredicted RBP14.05□□□□□ -0.16
LTBR-207ENST00000539925 SLC35D1Q9NTN3 355 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 ACACBO00763 2458 aa14.05□□□□□ -0.16
LTBR-207ENST00000539925 A0A1W2PPE3 182 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 CEBPZOSA8MTT3 80 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 CRYZL1O95825 349 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 OR8U8P0C7N1 319 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 PRRX1P54821 245 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 F2RL1P55085 397 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 TOR2AQ5JU69 321 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 SPANXN5Q5MJ07 72 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 WDR25Q64LD2 544 aaPredicted RBP14.04□□□□□ -0.16
LTBR-207ENST00000539925 CLEC9AQ6UXN8 241 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 COMMD1Q8N668 190 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 TMEM217Q8N7C4 229 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 PINX1Q96BK5 328 aaKnown RBP14.04□□□□□ -0.16
LTBR-207ENST00000539925 RHOVQ96L33 236 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 TMEM133Q9H2Q1 129 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 TMEM140Q9NV12 185 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 LYNX1G3V0Z9 82 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 IFNA17P01571 189 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 CT45A6P0DMU7 189 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 CT45A5P0DMU8 189 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 CT45A7P0DMV0 189 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 LYNX1P0DP58 116 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 RAB13P51153 203 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 SLC25A24Q6NUK1 477 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 PUSL1Q8N0Z8 303 aaKnown RBP14.04□□□□□ -0.16
LTBR-207ENST00000539925 SCGB1C1Q8TD33 95 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 PATZ1Q9HBE1 687 aaKnown RBP14.04□□□□□ -0.16
LTBR-207ENST00000539925 FKBP11Q9NYL4 201 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 PRNDQ9UKY0 176 aa14.04□□□□□ -0.16
LTBR-207ENST00000539925 SPTBN1Q01082 2364 aaKnown RBP14.03□□□□□ -0.16
LTBR-207ENST00000539925 PPIAL4CA0A0B4J2A2 164 aa14.03□□□□□ -0.16
LTBR-207ENST00000539925 F12P00748 615 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms