RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 C5orf30Q96GV9 206 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
UBE3B-209ENST00000539584 CXorf1O96002 111 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 GRPP07492 148 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 NPPCP23582 126 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 GABRA2P47869 451 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 GNB1P62873 340 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 FAM78BQ5VT40 261 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 GATAD1Q8WUU5 269 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 SFRP2Q96HF1 295 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 OBP2BQ9NPH6 170 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 LY96Q9Y6Y9 160 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 PCSK5Q92824 1860 aa11.07□□□□□ -0.64
UBE3B-209ENST00000539584 A0A0U1RQK1 487 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 C9orf172C9J069 976 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 AESQ08117 197 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 SMIM21Q3B7S5 101 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 R3HDM4Q96D70 268 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 COQ2Q96H96 371 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 FREM1Q5H8C1 2179 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 SPEGQ15772 3267 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 TRGV5A0A0B4J1U4 118 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 MT-CO2P00403 227 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 OR10J1P30954 320 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 KLF14Q8TD94 323 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-209ENST00000539584 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
UBE3B-209ENST00000539584 NDUFB4O95168 129 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 CHRNA7P36544 502 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
UBE3B-209ENST00000539584 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-209ENST00000539584 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 BTNL3Q6UXE8 466 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 LINC00696Q6ZRV3 163 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 MRGPRDQ8TDS7 321 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 ELOVL5Q9NYP7 299 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 PLA2G3Q9NZ20 509 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 JPT1Q9UK76 154 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 EYSQ5T1H1 3165 aa11.05□□□□□ -0.64
UBE3B-209ENST00000539584 COL27A1Q8IZC6 1860 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-209ENST00000539584 CHD3Q12873 2000 aaKnown RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 LINC00473A8K010 186 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 C3orf80F5H4A9 247 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 SPINK2P20155 84 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 KITLGP21583 273 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 CD82P27701 267 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 SELENOTP62341 195 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 FAM90A1Q86YD7 464 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 OR4A16Q8NH70 328 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 SGMS2Q8NHU3 365 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 ZNF407Q9C0G0 2248 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 TRGV8A0A0C4DH27 118 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 ESDP10768 282 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 ERVK-16P61578 105 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 NUTF2P61970 127 aaKnown RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 FOXF2Q12947 444 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 TRIP6Q15654 476 aaKnown RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 C3AR1Q16581 482 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 CR1LQ2VPA4 569 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 PPP1R35Q8TAP8 253 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 QTRT1Q9BXR0 403 aaKnown RBP11.04□□□□□ -0.64
UBE3B-209ENST00000539584 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 DOCK10Q96BY6 2186 aa11.04□□□□□ -0.64
UBE3B-209ENST00000539584 C9JCJ5 164 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 FNDC10F2Z333 226 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 C15orf65H3BRN8 121 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 M0QZK8 103 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 YPEL1O60688 119 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 CELA3BP08861 270 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 RNF224P0DH78 156 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 NDUFB7P17568 137 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 GPR12P47775 334 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 ATP5G3P48201 142 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 TLE1Q04724 770 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 Q6ZT83 130 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 TMEM178AQ8NBL3 297 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
UBE3B-209ENST00000539584 CORO2AQ92828 525 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms