RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SHOXO15266 292 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 HSPB1P04792 205 aaKnown RBP17.12■□□□□ 0.33
SCARB1-206ENST00000539320 CRYGBP07316 175 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 RRASP10301 218 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 PJVKQ0ZLH3 352 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 ADTRPQ96IZ2 230 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 ZNF355PQ9NSJ1 428 aa17.12■□□□□ 0.33
SCARB1-206ENST00000539320 ELF5Q9UKW6 265 aaPredicted RBP17.12■□□□□ 0.33
SCARB1-206ENST00000539320 KMT2CQ8NEZ4 4911 aaKnown RBP17.11■□□□□ 0.33
SCARB1-206ENST00000539320 PITPNAQ00169 270 aa17.11■□□□□ 0.33
SCARB1-206ENST00000539320 ACSM6Q6P461 480 aa17.11■□□□□ 0.33
SCARB1-206ENST00000539320 YTHDF1Q9BYJ9 559 aaKnown RBP17.11■□□□□ 0.33
SCARB1-206ENST00000539320 SCGNO76038 276 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 DUTP33316 252 aaKnown RBP17.1■□□□□ 0.33
SCARB1-206ENST00000539320 CDNFQ49AH0 187 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 TPRA1Q86W33 373 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 OR6Q1Q8NGQ2 317 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 DDB2Q92466 427 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 TMEM68Q96MH6 324 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 DAPK2Q9UIK4 370 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 SSR3Q9UNL2 185 aa17.1■□□□□ 0.33
SCARB1-206ENST00000539320 TENM3Q9P273 2699 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 C13orf42A0A1B0GVH6 325 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 SRRM4A7MD48 611 aaKnown RBP17.09■□□□□ 0.33
SCARB1-206ENST00000539320 CRYZL1O95825 349 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 VMA21Q3ZAQ7 101 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 HACD4Q5VWC8 232 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 SFXN4Q6P4A7 337 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 OR5T1Q8NG75 326 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 LGALS14Q8TCE9 139 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 NUDCD2Q8WVJ2 157 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 SMAD5-AS1Q9Y6J3 95 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 U3KQK5 164 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 STAB2Q8WWQ8 2551 aa17.09■□□□□ 0.33
SCARB1-206ENST00000539320 HUWE1Q7Z6Z7 4374 aaKnown RBP17.08■□□□□ 0.33
SCARB1-206ENST00000539320 TMEM235A6NFC5 223 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 LINC00473A8K010 186 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 SPNP16150 400 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 UBE2KP61086 200 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 ZNF773Q6PK81 442 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 ASCL2Q99929 193 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 ST6GALNAC5Q9BVH7 336 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 DCSTAMPQ9H295 470 aa17.08■□□□□ 0.32
SCARB1-206ENST00000539320 A0A0G2JLM5 398 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 CTXN2P0C2S0 81 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 GNG2P59768 71 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 ZNF645Q8N7E2 425 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 TEX45Q8NA69 505 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 OSR1Q8TAX0 266 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-206ENST00000539320 OR4C12Q96R67 309 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 OR51E2Q9H255 320 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 RANGRFQ9HD47 186 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-206ENST00000539320 RHBDL2Q9NX52 303 aa17.07■□□□□ 0.32
SCARB1-206ENST00000539320 J3QRK9 145 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 GP9P14770 177 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 ZP3P21754 424 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 PRSS8Q16651 343 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 MRGPRG-AS1Q2M3A8 158 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 PHB2Q99623 299 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 TINAGL1Q9GZM7 467 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-206ENST00000539320 COA4Q9NYJ1 87 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 OR2W1Q9Y3N9 320 aa17.06■□□□□ 0.32
SCARB1-206ENST00000539320 BRI3O95415 125 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 CD36P16671 472 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 NFYAP23511 347 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-206ENST00000539320 SDC2P34741 201 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 TNXAQ16473 311 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 CNIH2Q6PI25 160 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 IDO2Q6ZQW0 420 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 KCTD9Q7L273 389 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
SCARB1-206ENST00000539320 HLA-DQB1P01920 261 aa17.04■□□□□ 0.32
SCARB1-206ENST00000539320 AADACP22760 399 aa17.04■□□□□ 0.32
SCARB1-206ENST00000539320 DEFA5Q01523 94 aa17.04■□□□□ 0.32
SCARB1-206ENST00000539320 MXD1Q05195 221 aa17.04■□□□□ 0.32
SCARB1-206ENST00000539320 SRSF12Q8WXF0 261 aaKnown RBP17.04■□□□□ 0.32
SCARB1-206ENST00000539320 MRPS7Q9Y2R9 242 aaKnown RBP17.04■□□□□ 0.32
SCARB1-206ENST00000539320 RBMX2Q9Y388 322 aaKnown RBP17.04■□□□□ 0.32
SCARB1-206ENST00000539320 ANKRD34BA5PLL1 514 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 SSX5O60225 188 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 CREBL2O60519 120 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-206ENST00000539320 FCGR3BO75015 233 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 SLC22A5O76082 557 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 CLEC2LP0C7M8 214 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 SAA1P0DJI8 122 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-206ENST00000539320 APELAP0DMC3 54 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 SCAND1P57086 179 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 HAPLN4Q86UW8 402 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 ACOT12Q8WYK0 555 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 RSRP1Q9BUV0 290 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 PRELID3BQ9Y3B1 194 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 ETV7Q9Y603 341 aa17.03■□□□□ 0.32
SCARB1-206ENST00000539320 IGKV1D-13A0A0B4J2D9 117 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 LOC100506127A0A0U1RQW1 187 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 MSGN1A6NI15 193 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 MPPED1O15442 326 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 OR9G9P0C7N8 305 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 IGKV1-13P0DP09 117 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 DYRK1AQ13627 763 aa17.02■□□□□ 0.32
SCARB1-206ENST00000539320 CDK10Q15131 360 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms