RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ODF3L1Q8IXM7 274 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 TCTEX1D2Q8WW35 142 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 C2orf50Q96LR7 162 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 RANBP3Q9H6Z4 567 aaPredicted RBP13.94□□□□□ -0.18
CLN6-202ENST00000538696 SAA2-SAA4A0A096LPE2 208 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 B3GALNT1O75752 331 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 CDS2O95674 445 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 IFNA21P01568 189 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 IGKV1-39P01597 117 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 IGKV1D-39P04432 117 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 SAA2P0DJI9 122 aaPredicted RBP13.93□□□□□ -0.18
CLN6-202ENST00000538696 SAA4P35542 130 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 SRP14P37108 136 aaKnown RBP13.93□□□□□ -0.18
CLN6-202ENST00000538696 PRRX1P54821 245 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 LINC00205P59089 165 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 CATR1Q13166 79 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 MIDNQ504T8 468 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 ZNF585BQ52M93 769 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 OR2B11Q5JQS5 317 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 LYG1Q8N1E2 194 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 GRPEL2Q8TAA5 225 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 C17orf50Q8WW18 174 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 IL22RA2Q969J5 263 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 HSD17B10Q99714 261 aaKnown RBP13.93□□□□□ -0.18
CLN6-202ENST00000538696 ZNF251Q9BRH9 671 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 GAB2Q9UQC2 676 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 FN1P02751 2386 aaKnown RBP13.93□□□□□ -0.18
CLN6-202ENST00000538696 NAV3Q8IVL0 2385 aa13.93□□□□□ -0.18
CLN6-202ENST00000538696 LINC00473A8K010 186 aa13.92□□□□□ -0.18
CLN6-202ENST00000538696 DUTP33316 252 aaKnown RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 IAH1Q2TAA2 248 aaPredicted RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 C9orf139Q6ZV77 190 aa13.92□□□□□ -0.18
CLN6-202ENST00000538696 BCL6BQ8N143 479 aaPredicted RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 RBPMSQ93062 196 aaKnown RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 HYLS1Q96M11 299 aa13.92□□□□□ -0.18
CLN6-202ENST00000538696 NMES1Q9C002 83 aa13.92□□□□□ -0.18
CLN6-202ENST00000538696 CDC42EP3Q9UKI2 254 aa13.92□□□□□ -0.18
CLN6-202ENST00000538696 TBL2Q9Y4P3 447 aaKnown RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 NSD1Q96L73 2696 aaPredicted RBP13.92□□□□□ -0.18
CLN6-202ENST00000538696 A0A0U1RQK1 487 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 DUXBA0A1W2PPF3 345 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 SERPINE2P07093 398 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 EPHA1P21709 976 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 HTR1DP28221 377 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 LPAR6P43657 344 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 BRWD1-AS2P59051 145 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 BPIFB3P59826 476 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 LRRC37A5PQ49AS3 106 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 ZBTB8BQ8NAP8 495 aaPredicted RBP13.91□□□□□ -0.18
CLN6-202ENST00000538696 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
CLN6-202ENST00000538696 OR10X1Q8NGY0 326 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 PPP1R1CQ8WVI7 109 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 C22orf15Q8WYQ4 148 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 MS4A7Q9GZW8 240 aaPredicted RBP13.91□□□□□ -0.18
CLN6-202ENST00000538696 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 AMMECR1Q9Y4X0 333 aaPredicted RBP13.91□□□□□ -0.18
CLN6-202ENST00000538696 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
CLN6-202ENST00000538696 A0A0G2JRQ6 117 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 LY6LH3BQJ8 138 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 RAB29O14966 203 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 RAMP3O60896 148 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 LGALS4P56470 323 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 ZNF816Q0VGE8 651 aaPredicted RBP13.9□□□□□ -0.18
CLN6-202ENST00000538696 IL15RAQ13261 267 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 DIAPH2-AS1Q14236 149 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 MINOS1Q5TGZ0 78 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 LAMTOR1Q6IAA8 161 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 SPAG16Q8N0X2 631 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 DYNAPQ8N1N2 210 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 C9orf62Q8N4C0 152 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 COMMD9Q9P000 198 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 GSKIPQ9P0R6 139 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 MINOS1-NBL1R4GNA1 71 aa13.9□□□□□ -0.18
CLN6-202ENST00000538696 FXYD6-FXYD2A0A087WZ82 144 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 IGKV1-5P01602 117 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 SRD5A1P18405 259 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 PAX6P26367 422 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 ZNF137PP52743 207 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 CYCSP99999 105 aaKnown RBP13.9□□□□□ -0.19
CLN6-202ENST00000538696 NMSQ5H8A3 153 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 ST6GALNAC6Q969X2 333 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 PLSCR3Q9NRY6 295 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 DPM3Q9P2X0 92 aa13.9□□□□□ -0.19
CLN6-202ENST00000538696 MTORP42345 2549 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 LEUTXA8MZ59 168 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 CRLF1O75462 422 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 S1PR2O95136 353 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 MPC2O95563 127 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 IL3RAP26951 378 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 THBS3P49746 956 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 TUSC1Q2TAM9 212 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 DEFB112Q30KQ8 113 aa13.89□□□□□ -0.19
CLN6-202ENST00000538696 ZNF833PQ6ZTB9 187 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms