RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 LGALS14Q8TCE9 139 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 YTHDF1Q9BYJ9 559 aaKnown RBP11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 SLA2Q9H6Q3 261 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 RNF167Q9H6Y7 350 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 LOC100506127A0A0U1RQW1 187 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 TMEM235A6NFC5 223 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 LINC00473A8K010 186 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 CRYZL1O95825 349 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 CRYGBP07316 175 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 CLEC2LP0C7M8 214 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 APELAP0DMC3 54 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 RRASP10301 218 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 NFYAP23511 347 aaPredicted RBP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 DUTP33316 252 aaKnown RBP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 SDC2P34741 201 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 DEFA5Q01523 94 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 SFXN4Q6P4A7 337 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 Q6ZS49 121 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 POC5Q8NA72 575 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 RHOVQ96L33 236 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 ASCL2Q99929 193 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 CENPOQ9BU64 300 aa11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.02□□□□□ -0.65
RTN3P1-201ENST00000536295 C13orf42A0A1B0GVH6 325 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 GNG2P59768 71 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 PITPNAQ00169 270 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 NEDD8Q15843 81 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 IDO2Q6ZQW0 420 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 DDB2Q92466 427 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 ADTRPQ96IZ2 230 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 PHB2Q99623 299 aa11.01□□□□□ -0.65
RTN3P1-201ENST00000536295 ANKRD34BA5PLL1 514 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 TUSC2O75896 110 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 SPNP16150 400 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 TNXAQ16473 311 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 OR2B11Q5JQS5 317 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 IDNKQ5T6J7 187 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 ACSM6Q6P461 480 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 ZNF645Q8N7E2 425 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 DCUN1D5Q9BTE7 237 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 DCSTAMPQ9H295 470 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 RHBDL2Q9NX52 303 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 COA4Q9NYJ1 87 aa11□□□□□ -0.65
RTN3P1-201ENST00000536295 MSGN1A6NI15 193 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 H3BUA1 57 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 SSX5O60225 188 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 FCGR3BO75015 233 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 SCGNO76038 276 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 CTXN2P0C2S0 81 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 CD36P16671 472 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 UBE2KP61086 200 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 MRGPRG-AS1Q2M3A8 158 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 CNIH2Q6PI25 160 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 KCTD9Q7L273 389 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 HAPLN4Q86UW8 402 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 TEX45Q8NA69 505 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 OR5H6Q8NGV6 325 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 ACOT12Q8WYK0 555 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 OR4C12Q96R67 309 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 RSRP1Q9BUV0 290 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 OR2W1Q9Y3N9 320 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
RTN3P1-201ENST00000536295 TRAV18A0A075B6X5 111 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 MPPED1O15442 326 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 PRSS8Q16651 343 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 OR6Q1Q8NGQ2 317 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 OSR1Q8TAX0 266 aaPredicted RBP10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 WWC2-AS2Q96NR7 200 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 TINAGL1Q9GZM7 467 aaPredicted RBP10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 RANGRFQ9HD47 186 aaPredicted RBP10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 RBMX2Q9Y388 322 aaKnown RBP10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 PRELID3BQ9Y3B1 194 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 U3KQK5 164 aa10.98□□□□□ -0.65
RTN3P1-201ENST00000536295 FCER2P06734 321 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 SAA1P0DJI8 122 aaPredicted RBP10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 GP9P14770 177 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 TCTEX1D2Q8WW35 142 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 SLC25A38Q96DW6 304 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 ELOVL1Q9BW60 279 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 SPATA2Q9UM82 520 aa10.97□□□□□ -0.65
RTN3P1-201ENST00000536295 SLC22A5O76082 557 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 ACTL6BO94805 426 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 IGLV2-14P01704 120 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms