RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GSTT2BP0CG30 244 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 RAB3BP20337 219 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 RAB6AP20340 208 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 Q8N402 240 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 TEX45Q8NA69 505 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 IL17DQ8TAD2 202 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 TINAGL1Q9GZM7 467 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 ATG5Q9H1Y0 275 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 SLC2A8Q9NY64 477 aa10.19□□□□□ -0.78
CLSTN3-205ENST00000535452 DNAH3Q8TD57 4116 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 TRBV6-7A0A0A0MS04 114 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 TMEM272A0A1B0GTI8 110 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 FAM223BA6NKX1 122 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 OR2A4O95047 310 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 CRYZL1O95825 349 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 IGLV1-51P01701 117 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 OR9G9P0C7N8 305 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 EGR2P11161 476 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 HIST1H1DP16402 221 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 GNB3P16520 340 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 AQP4P55087 323 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 ATP5G2Q06055 141 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 IRF3Q14653 427 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 TMEM91Q6ZNR0 172 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 FAM223AQ8IWN6 122 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 MMD2Q8IY49 270 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 AIFM2Q9BRQ8 373 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 DUSP21Q9H596 190 aa10.18□□□□□ -0.78
CLSTN3-205ENST00000535452 TRAV1-2A0A0B4J238 106 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 MSGN1A6NI15 193 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 IFITM5A6NNB3 132 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 TPPPO94811 219 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 CD37P11049 281 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 TMEM50BP56557 158 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 GNG2P59768 71 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 UBE2KP61086 200 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 FABP5Q01469 135 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 IGSF11Q5DX21 431 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 PLAC9Q5JTB6 97 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 OR2K2Q8NGT1 345 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 SRSF12Q8WXF0 261 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 CNBD2Q96M20 576 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
CLSTN3-205ENST00000535452 CYB5BO43169 146 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 BRI3O95415 125 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 APELAP0DMC3 54 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 DTYMKP23919 212 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 CRHBPP24387 322 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 TBCEQ15813 527 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 HAPLN4Q86UW8 402 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 ST6GALNAC5Q9BVH7 336 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 Q9H521 79 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
CLSTN3-205ENST00000535452 IGKV1-6A0A0C4DH72 117 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 A8MZ25 164 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 J3QRK9 145 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 FCGR3BO75015 233 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 ARPC4P59998 168 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 RHOGP84095 191 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 EXOSC2Q13868 293 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 KLF5Q13887 457 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 CDK10Q15131 360 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 PRSS8Q16651 343 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 ZNF343Q6P1L6 599 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 LAX1Q8IWV1 398 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 ZNF645Q8N7E2 425 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 NECAP1Q8NC96 275 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 MAFIPQ8WZ33 124 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 CYYR1Q96J86 154 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 ZNF230Q9UIE0 474 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 SORL1Q92673 2214 aa10.15□□□□□ -0.78
CLSTN3-205ENST00000535452 TRDV1A0A1B0GX56 115 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 SHISA3A0PJX4 238 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 MFNGO00587 321 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 DEFA4P12838 97 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 GALP22466 123 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 LINC00205P59089 165 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 SLC16A13Q7RTY0 426 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 TCTEX1D2Q8WW35 142 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 GFI1Q99684 422 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 HSD17B10Q99714 261 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 DCSTAMPQ9H295 470 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 NDUFB11Q9NX14 153 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 SIGLEC8Q9NYZ4 499 aa10.14□□□□□ -0.79
CLSTN3-205ENST00000535452 NBEAL2Q6ZNJ1 2754 aa10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-205ENST00000535452 PROP1O75360 226 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms