RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 CCL13Q99616 98 aa2.34□□□□□ -2.03
HIPK3-206ENST00000534262 SIGMAR1Q99720 223 aa2.34□□□□□ -2.03
HIPK3-206ENST00000534262 FKBP14Q9NWM8 211 aa2.34□□□□□ -2.03
HIPK3-206ENST00000534262 PHLDA3Q9Y5J5 127 aa2.34□□□□□ -2.03
HIPK3-206ENST00000534262 PXMP4Q9Y6I8 212 aa2.34□□□□□ -2.03
HIPK3-206ENST00000534262 ZBED9Q6R2W3 1325 aa2.34□□□□□ -2.04
HIPK3-206ENST00000534262 CABIN1Q9Y6J0 2220 aa2.34□□□□□ -2.04
HIPK3-206ENST00000534262 ROCK1Q13464 1354 aa2.34□□□□□ -2.04
HIPK3-206ENST00000534262 CPS1P31327 1500 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 LOXHD1Q8IVV2 1947 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 LEUTXA8MZ59 168 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 LECT2O14960 151 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 BET1O15155 118 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 NRASP01111 189 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 HRASP01112 189 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 KRASP01116 189 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 C1QBP02746 253 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 CA7P43166 264 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 FOXA1P55317 472 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 RPL19P84098 196 aaKnown RBP2.33□□□□□ -2.04
HIPK3-206ENST00000534262 BSPH1Q075Z2 132 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 GPHB5Q86YW7 130 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 SGPP2Q8IWX5 399 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 OR11G2Q8NGC1 345 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 OR2D3Q8NGH3 330 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 RNASE6Q93091 150 aaKnown RBP2.33□□□□□ -2.04
HIPK3-206ENST00000534262 RAD51AP1Q96B01 352 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 DCUN1D1Q96GG9 259 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 TSPAN32Q96QS1 320 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 UPK3BQ9BT76 320 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 CENPHQ9H3R5 247 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 NMNAT1Q9HAN9 279 aaPredicted RBP2.33□□□□□ -2.04
HIPK3-206ENST00000534262 CMTM6Q9NX76 183 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 DOK5Q9P104 306 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 DHCR7Q9UBM7 475 aaKnown RBP2.33□□□□□ -2.04
HIPK3-206ENST00000534262 PKIGQ9Y2B9 76 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 DOCK9Q9BZ29 2069 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 ZNF532Q9HCE3 1301 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 ROBO3Q96MS0 1386 aa2.33□□□□□ -2.04
HIPK3-206ENST00000534262 EFCAB5A4FU69 1503 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 SCN1AP35498 2009 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 PBRM1Q86U86 1689 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 TRAV26-2A0A0B4J265 109 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 IGHV1-69-2A0A0G2JMI3 117 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 A0A1B0GV50 99 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 ZNF729A6NN14 1252 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 A8MUN3 132 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 H0YJX3 145 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 H3BMM0 161 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 K7ERS5 55 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 LST1O00453 97 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 RTL8CO15255 209 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 TRGV3P03979 118 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 FAM228BP0C875 321 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 S100A2P29034 98 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 ZNF140P52738 457 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 CRYBA4P53673 196 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 FKBP1AP62942 108 aaKnown RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 BTN3A2P78410 334 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 HOXC5Q00444 222 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 LGALS9BQ3B8N2 356 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 LGALS9CQ6DKI2 356 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 C5orf46Q6UWT4 87 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 AKAP14Q86UN6 197 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 Q8N9L7 120 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 APCDD1LQ8NCL9 501 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 OR8B12Q8NGG6 310 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 RTN4IP1Q8WWV3 396 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 GNPNAT1Q96EK6 184 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 FOPNLQ96NB1 174 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 TRIM4Q9C037 500 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 NKX6-2Q9C056 277 aaPredicted RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
HIPK3-206ENST00000534262 C11orf1Q9H5F2 150 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 INIPQ9NRY2 104 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 GID8Q9NWU2 228 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 ANKRD30AQ9BXX3 1397 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 FAM135BQ49AJ0 1406 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 ADAMTS12P58397 1594 aa2.32□□□□□ -2.04
HIPK3-206ENST00000534262 ABCA5Q8WWZ7 1642 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 ADCY10Q96PN6 1610 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 MAP3K4Q9Y6R4 1608 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 NACAE9PAV3 2078 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 IGKV1D-37A0A075B6S9 117 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 GYPCP04921 128 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 RPL5P46777 297 aaKnown RBP2.31□□□□□ -2.04
HIPK3-206ENST00000534262 SNRPD2P62316 118 aaKnown RBP2.31□□□□□ -2.04
HIPK3-206ENST00000534262 DEFA6Q01524 100 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 FUT5Q11128 374 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 APOFQ13790 326 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 MRPL51Q4U2R6 128 aaKnown RBP2.31□□□□□ -2.04
HIPK3-206ENST00000534262 TNFAIP8L3Q5GJ75 292 aa2.31□□□□□ -2.04
HIPK3-206ENST00000534262 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms