RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 J3QRK9 145 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
CPSF1-211ENST00000533492 SCGNO76038 276 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 CTXN2P0C2S0 81 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 NHLRC4P0CG21 123 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-211ENST00000533492 PITPNAQ00169 270 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 VMA21Q3ZAQ7 101 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 TMEM177Q53S58 311 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 HACD4Q5VWC8 232 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-211ENST00000533492 POC5Q8NA72 575 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
CPSF1-211ENST00000533492 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPSF1-211ENST00000533492 IGKV1D-8A0A087WSZ0 117 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 H3BUA1 57 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 CRYGBP07316 175 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
CPSF1-211ENST00000533492 GNG2P59768 71 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 SFXN4Q6P4A7 337 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 PHB2Q99623 299 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 OR51E2Q9H255 320 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 DCSTAMPQ9H295 470 aa11.92□□□□□ -0.5
CPSF1-211ENST00000533492 TMEM235A6NFC5 223 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
CPSF1-211ENST00000533492 CRYZL1O95825 349 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 SDC2P34741 201 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 MXD1Q05195 221 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 ZNF773Q6PK81 442 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 TEX45Q8NA69 505 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 OR6Q1Q8NGQ2 317 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 NUDCD2Q8WVJ2 157 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 ELOVL1Q9BW60 279 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 RANGRFQ9HD47 186 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-211ENST00000533492 SMAD5-AS1Q9Y6J3 95 aa11.91□□□□□ -0.5
CPSF1-211ENST00000533492 LOC100506127A0A0U1RQW1 187 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 SLC22A5O76082 557 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 NFYAP23511 347 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-211ENST00000533492 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-211ENST00000533492 CNIH2Q6PI25 160 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 ZNF645Q8N7E2 425 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-211ENST00000533492 LGALS14Q8TCE9 139 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 DDB2Q92466 427 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 ASCL2Q99929 193 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 COA4Q9NYJ1 87 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 OR2W1Q9Y3N9 320 aa11.9□□□□□ -0.5
CPSF1-211ENST00000533492 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 LINC00473A8K010 186 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 MPPED1O15442 326 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 TUSC2O75896 110 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 ACTL6BO94805 426 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 CD36P16671 472 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 ZP3P21754 424 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 UBE2KP61086 200 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 TNXAQ16473 311 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 ACOT12Q8WYK0 555 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 RHBDL2Q9NX52 303 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 PRELID3BQ9Y3B1 194 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 U3KQK5 164 aa11.89□□□□□ -0.51
CPSF1-211ENST00000533492 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 CREBL2O60519 120 aaPredicted RBP11.88□□□□□ -0.51
CPSF1-211ENST00000533492 FCGR3BO75015 233 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 CLEC2LP0C7M8 214 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 APELAP0DMC3 54 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 SPNP16150 400 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 AADACP22760 399 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 NEDD8Q15843 81 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 PRSS8Q16651 343 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 IDNKQ5T6J7 187 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 KCTD9Q7L273 389 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 RSRP1Q9BUV0 290 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 TINAGL1Q9GZM7 467 aaPredicted RBP11.88□□□□□ -0.51
CPSF1-211ENST00000533492 ANXA10Q9UJ72 324 aa11.88□□□□□ -0.51
CPSF1-211ENST00000533492 MRPS7Q9Y2R9 242 aaKnown RBP11.88□□□□□ -0.51
CPSF1-211ENST00000533492 RBMX2Q9Y388 322 aaKnown RBP11.88□□□□□ -0.51
CPSF1-211ENST00000533492 TRAV18A0A075B6X5 111 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 GP9P14770 177 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 SCAND1P57086 179 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 OR2B11Q5JQS5 317 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
CPSF1-211ENST00000533492 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 RNF167Q9H6Y7 350 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 TNCP24821 2201 aa11.87□□□□□ -0.51
CPSF1-211ENST00000533492 DNAH9Q9NYC9 4486 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 SSX5O60225 188 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 BRI3O95415 125 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 ARPC4P59998 168 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 CDK10Q15131 360 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms