RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 PLEKHA2Q9HB19 425 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 SLC35D1Q9NTN3 355 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 HILPDAQ9Y5L2 63 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 IGHV3OR16-10A0A075B7F0 116 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 DUXBA0A1W2PPF3 345 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 FCGR3BO75015 233 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 SERPINE2P07093 398 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 HLA-GP17693 338 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 LPAR6P43657 344 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 RAB13P51153 203 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 EBI3Q14213 229 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 RTL8BQ17RB0 113 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
HIF3A-215ENST00000533145 CADM3Q8N126 398 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 OR4S2Q8NH73 311 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 WASHC3Q9Y3C0 194 aa11.35□□□□□ -0.59
HIF3A-215ENST00000533145 CELSR1Q9NYQ6 3014 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 ZANQ9Y493 2812 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 TIMM23O14925 209 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 RAMP3O60896 148 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 LY6G6DO95868 133 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 IGKV1-39P01597 117 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 IGKV1D-39P04432 117 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 CBX3Q13185 183 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 AANATQ16613 207 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 POU2AF1Q16633 256 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 FAM120AOSQ5T036 256 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 OR4C13Q8NGP0 309 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 LHFPL5Q8TAF8 219 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-215ENST00000533145 RBPMSQ93062 196 aaKnown RBP11.34□□□□□ -0.59
HIF3A-215ENST00000533145 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 MS4A7Q9GZW8 240 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-215ENST00000533145 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 COMMD9Q9P000 198 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 NF1P21359 2839 aa11.34□□□□□ -0.59
HIF3A-215ENST00000533145 ZFHX3Q15911 3703 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 A0A0U1RQK1 487 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 ATG12O94817 140 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 FBP1P09467 338 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 BRS3P32247 399 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 ZNF695Q8IW36 515 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 CHAC2Q8WUX2 184 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 LSM10Q969L4 123 aaKnown RBP11.33□□□□□ -0.6
HIF3A-215ENST00000533145 FLYWCH2Q96CP2 140 aaKnown RBP11.33□□□□□ -0.6
HIF3A-215ENST00000533145 FAM96BQ9Y3D0 163 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 ACANP16112 2415 aa11.33□□□□□ -0.6
HIF3A-215ENST00000533145 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 H7C2Y5 167 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 S1PR2O95136 353 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 VENTXO95231 258 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 CRYZL1O95825 349 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 HRASP01112 189 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 NQO2P16083 231 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 LGALS7P47929 136 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 RRAS2P62070 204 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-215ENST00000533145 OR2B11Q5JQS5 317 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 SMR3AQ99954 134 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 MED28Q9H204 178 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 RAB18Q9NP72 206 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 TMED3Q9Y3Q3 217 aa11.32□□□□□ -0.6
HIF3A-215ENST00000533145 IGHV3-72A0A0B4J1Y9 119 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 HMX3A6NHT5 357 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 IL6RP08887 468 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-215ENST00000533145 P0C879 139 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 HNF1AP20823 631 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 VDAC1P21796 283 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 PAX6P26367 422 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 BCL6BQ8N143 479 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-215ENST00000533145 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 PRR13Q9NZ81 148 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-215ENST00000533145 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
HIF3A-215ENST00000533145 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
HIF3A-215ENST00000533145 SHOXO15266 292 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 SSNA1O43805 119 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 MOSP00540 346 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 SULT1A3P0DMM9 295 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 SULT1A4P0DMN0 295 aa11.3□□□□□ -0.6
HIF3A-215ENST00000533145 SLC25A6P12236 298 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms