RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
CPSF1-210ENST00000532935 ARPC4P59998 168 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 CX3CL1P78423 397 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
CPSF1-210ENST00000532935 CBX3Q13185 183 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 TMEM69Q5SWH9 247 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 ETV3LQ6ZN32 361 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 ZNF695Q8IW36 515 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 ZNF645Q8N7E2 425 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 CLCC1Q96S66 551 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 CCDC32Q9BV29 185 aa12.03□□□□□ -0.48
CPSF1-210ENST00000532935 TRAV41A0A0B4J266 112 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 SLC25A17O43808 307 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 TUSC2O75896 110 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 RRASP10301 218 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 CBX5P45973 191 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 TAS2R20P59543 309 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 RTL8BQ17RB0 113 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 OXLD1Q5BKU9 147 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 KPRPQ5T749 579 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-210ENST00000532935 BVESQ8NE79 360 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 DDB2Q92466 427 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 FBXO7Q9Y3I1 522 aa12.02□□□□□ -0.49
CPSF1-210ENST00000532935 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 LINC00473A8K010 186 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 SLC22A5O76082 557 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 CA2P00918 260 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 IGLV1-40P01703 118 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 IGLV2-23P01705 113 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 FCER2P06734 321 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-210ENST00000532935 CDX1P47902 265 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-210ENST00000532935 LGALS7P47929 136 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 CRIP2P52943 208 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-210ENST00000532935 ECSCRQ19T08 205 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-210ENST00000532935 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 LINC00482Q8N8I6 264 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 MINDY2Q8NBR6 621 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 ABHD5Q8WTS1 349 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 SNAPC3Q92966 411 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 COMMD3Q9UBI1 195 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 RBMX2Q9Y388 322 aaKnown RBP12.01□□□□□ -0.49
CPSF1-210ENST00000532935 TGP01266 2768 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 TNCP24821 2201 aa12.01□□□□□ -0.49
CPSF1-210ENST00000532935 SHOXO15266 292 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 TPPPO94811 219 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 IGLV2-14P01704 120 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 EIF4EP06730 217 aaKnown RBP12□□□□□ -0.49
CPSF1-210ENST00000532935 IGLL1P15814 213 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 MYCNOSP40205 109 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 C19orf54Q5BKX5 351 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 TMEM65Q6PI78 240 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
CPSF1-210ENST00000532935 GDPD1Q8N9F7 314 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 DIRAS2Q96HU8 199 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 SOSTQ9BQB4 213 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 KLK15Q9H2R5 256 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 IFT46Q9NQC8 304 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 NUBP2Q9Y5Y2 271 aa12□□□□□ -0.49
CPSF1-210ENST00000532935 A0A1W2PN81 502 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 FABP12A6NFH5 140 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 SRRM4A7MD48 611 aaKnown RBP11.99□□□□□ -0.49
CPSF1-210ENST00000532935 CRYZL1O95825 349 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 APOA1P02647 267 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 CRYGBP07316 175 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 AADACP22760 399 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 FCGR2CP31995 323 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 CHRNA7P36544 502 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 TMEM267Q0VDI3 215 aaPredicted RBP11.99□□□□□ -0.49
CPSF1-210ENST00000532935 KCTD9Q7L273 389 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 PPP1R27Q86WC6 154 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 LAX1Q8IWV1 398 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 OR5AP2Q8NGF4 316 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 RCC1LQ96I51 464 aaKnown RBP11.99□□□□□ -0.49
CPSF1-210ENST00000532935 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 P2RX4Q99571 388 aa11.99□□□□□ -0.49
CPSF1-210ENST00000532935 FAM103A1Q9BTL3 118 aaKnown RBP11.99□□□□□ -0.49
CPSF1-210ENST00000532935 CCL24O00175 119 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 ARPC1BO15143 372 aaKnown RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 SOX15O60248 233 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 UPK1BO75841 260 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 PRSS3P35030 304 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 RAB9AP51151 201 aa11.98□□□□□ -0.49
CPSF1-210ENST00000532935 EIF4EBP1Q13541 118 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 KIAA0141Q14154 515 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-210ENST00000532935 FXYD3Q14802 87 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms