RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 UBE2G2P60604 165 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 GNB1P62873 340 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 COLCA1Q6ZS62 124 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 STRADBQ9C0K7 418 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
NXF1-213ENST00000532297 LINC00310P59036 64 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 TFF3Q07654 80 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 ZNF585BQ52M93 769 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 FBXW9Q5XUX1 488 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 OR5AU1Q8NGC0 362 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 KCNS2Q9ULS6 477 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 TFF1P04155 84 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
NXF1-213ENST00000532297 MSMO1Q15800 293 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 MKXQ8IYA7 352 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 FOXJ2Q9P0K8 574 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
NXF1-213ENST00000532297 LOXL2Q9Y4K0 774 aa12.51□□□□□ -0.41
NXF1-213ENST00000532297 TECTAO75443 2155 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 CRISP2P16562 243 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 CBLN1P23435 193 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 ATP5G3P48201 142 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 YPEL3P61236 119 aaPredicted RBP12.5□□□□□ -0.41
NXF1-213ENST00000532297 CEACAM21Q3KPI0 293 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 CIB3Q96Q77 187 aaPredicted RBP12.5□□□□□ -0.41
NXF1-213ENST00000532297 TMEM147Q9BVK8 224 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 DCHS1Q96JQ0 3298 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 MDFIC2A0A1B0GVS7 189 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 TMPRSS2O15393 492 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.41
NXF1-213ENST00000532297 PDE6DO43924 150 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 MMDQ15546 238 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 OR5P3Q8WZ94 311 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 SLC35E1Q96K37 410 aa12.5□□□□□ -0.41
NXF1-213ENST00000532297 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 LRP5LA4QPB2 252 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 WDR1O75083 606 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 IGHEP01854 428 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 KITLGP21583 273 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 LHX2P50458 406 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
NXF1-213ENST00000532297 SELENOTP62341 195 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 FGFRL1Q8N441 504 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 LIN7CQ9NUP9 197 aaKnown RBP12.49□□□□□ -0.41
NXF1-213ENST00000532297 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
NXF1-213ENST00000532297 F6UZH7 168 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 NEURL1O76050 574 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 KRASP01116 189 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 HNF1AP20823 631 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
NXF1-213ENST00000532297 BAGE3Q86Y29 109 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 NPCDR1Q9BY65 106 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 MSL2Q9HCI7 577 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 CLN8Q9UBY8 286 aa12.49□□□□□ -0.41
NXF1-213ENST00000532297 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 CA6P23280 308 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 ATP6V1FQ16864 119 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 APOBEC3DQ96AK3 386 aaPredicted RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 CLDN18P56856 261 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 OR2M7Q8NG81 312 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 OR10P1Q8NGE3 313 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 MRPL18Q9H0U6 180 aaKnown RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 ZNF703Q9H7S9 590 aaPredicted RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
NXF1-213ENST00000532297 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
NXF1-213ENST00000532297 C20orf202A1L168 122 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 FAM90A26D6RGX4 464 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 F2Z2F3 143 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 SIRPB1O00241 398 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 DCAF12Q5T6F0 453 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 ATP1A1-AS1Q5TC04 95 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 FAM103A1Q9BTL3 118 aaKnown RBP12.47□□□□□ -0.41
NXF1-213ENST00000532297 CELA3BP08861 270 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 ESDP10768 282 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 KRTDAPP60985 99 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
NXF1-213ENST00000532297 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
NXF1-213ENST00000532297 THBS3P49746 956 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 ZNF90Q03938 601 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 C6orf15Q6UXA7 325 aaPredicted RBP12.47□□□□□ -0.41
NXF1-213ENST00000532297 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
NXF1-213ENST00000532297 RNASE8Q8TDE3 154 aaKnown RBP12.47□□□□□ -0.41
NXF1-213ENST00000532297 USF3Q68DE3 2245 aa12.46□□□□□ -0.41
NXF1-213ENST00000532297 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
NXF1-213ENST00000532297 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms