RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 BRD4O60885 1362 aaPredicted RBP1.45□□□□□ -2.18
CD44-234ENST00000531873 PCNX2A6NKB5 2137 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 ICE1Q9Y2F5 2266 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 DENND4BO75064 1496 aaPredicted RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 CFTRP13569 1480 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 TTC37Q6PGP7 1564 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 NUP160Q12769 1436 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 C9orf84Q5VXU9 1444 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 ACOX3O15254 700 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 PSCAO43653 123 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 CALB1P05937 261 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 CCL3P10147 92 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 ESDP10768 282 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 LGALS3P17931 250 aaKnown RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 TCL1AP56279 114 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 TMEM33P57088 247 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 HTR4Q13639 388 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 RSU1Q15404 277 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 CST6Q15828 149 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 LRRC75BQ2VPJ9 315 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 SAPCD1Q5SSQ6 148 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 SYPL2Q5VXT5 272 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 OR10K2Q6IF99 312 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 RASSF6Q6ZTQ3 369 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 DCXRQ7Z4W1 244 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 GID4Q8IVV7 300 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 RNASE6Q93091 150 aaKnown RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 CPNE2Q96FN4 548 aaPredicted RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 TMEM109Q9BVC6 243 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 NKX6-2Q9C056 277 aaPredicted RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 SMDT1Q9H4I9 107 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 EMC3Q9P0I2 261 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 HHLA2Q9UM44 414 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 GUCA1BQ9UMX6 200 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 HEY1Q9Y5J3 304 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 HSPE1-MOB4S4R3N1 261 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 COL5A1P20908 1838 aaPredicted RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 KDM5DQ9BY66 1539 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 KIF15Q9NS87 1388 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 ADCY10Q96PN6 1610 aa1.44□□□□□ -2.18
CD44-234ENST00000531873 RNF17Q9BXT8 1623 aaKnown RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 TNRC18O15417 2968 aaPredicted RBP1.44□□□□□ -2.18
CD44-234ENST00000531873 PTPRBP23467 1997 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 MROH2BQ7Z745 1585 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 PTPN13Q12923 2485 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 ZNF292O60281 2723 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 UACAQ9BZF9 1416 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 CNTLNQ9NXG0 1405 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 PPRC1Q5VV67 1664 aaKnown RBP1.43□□□□□ -2.18
CD44-234ENST00000531873 MALRD1Q5VYJ5 2156 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 GSTZ1O43708 216 aaPredicted RBP1.43□□□□□ -2.18
CD44-234ENST00000531873 LY6HO94772 140 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 CDS2O95674 445 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 MT-CO2P00403 227 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 SOD1P00441 154 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 CCL1P22362 96 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 DDTP30046 118 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 ANP32AP39687 249 aaKnown RBP1.43□□□□□ -2.18
CD44-234ENST00000531873 PSG4Q00888 419 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 TAF9Q16594 264 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 RGS21Q2M5E4 152 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 LPCAT4Q643R3 524 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 HCP5Q6MZN7 132 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 RASL11AQ6T310 242 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 SBSNQ6UWP8 590 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 LRRC34Q8IZ02 419 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 OR11H1Q8NG94 326 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 CMTM2Q8TAZ6 248 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 MS4A6EQ96DS6 147 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 C8orf76Q96K31 380 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 OR51I1Q9H343 314 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 SLC2A9Q9NRM0 540 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 ALKQ9UM73 1620 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 CACNA1BQ00975 2339 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 EP400Q96L91 3159 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 SIPA1L1O43166 1804 aa1.43□□□□□ -2.18
CD44-234ENST00000531873 PTPRJQ12913 1337 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 EVC2Q86UK5 1308 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 PTPRSQ13332 1948 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 ZNF462Q96JM2 2506 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 EPG5Q9HCE0 2579 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 MAP3K4Q9Y6R4 1608 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 TGIF2-C20orf24A0A0A6YYL0 155 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 IGHV3-73A0A0B4J1V6 119 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 DHRS12A0PJE2 317 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 OR6C6A6NF89 314 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 DCTN3O75935 186 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 LYPLA2O95372 231 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 APOMO95445 188 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 CTSGP08311 255 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 HIST1H1EP10412 219 aaKnown RBP1.42□□□□□ -2.18
CD44-234ENST00000531873 SLC25A16P16260 332 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 NPPCP23582 126 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 SERPINB10P48595 397 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 CDK9P50750 372 aaKnown RBP1.42□□□□□ -2.18
CD44-234ENST00000531873 AP2S1P53680 142 aaPredicted RBP1.42□□□□□ -2.18
CD44-234ENST00000531873 TAS2R45P59539 299 aa1.42□□□□□ -2.18
CD44-234ENST00000531873 NAA20P61599 178 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms