RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GNB3P16520 340 aa17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 PITPNAQ00169 270 aa17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 TAGLNQ01995 201 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 ARFRP1Q13795 201 aa17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 SDHAF2Q9NX18 166 aa17.18■□□□□ 0.34
TRAPPC4-210ENST00000531290 TRBV6-7A0A0A0MS04 114 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 AIREO43918 545 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 SPNP16150 400 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 POC5Q8NA72 575 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 OR5T1Q8NG75 326 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 GINS4Q9BRT9 223 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 CABLES2Q9BTV7 478 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 CENPOQ9BU64 300 aa17.17■□□□□ 0.34
TRAPPC4-210ENST00000531290 C13orf42A0A1B0GVH6 325 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 RAB27BO00194 218 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 DIRAS3O95661 229 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 HIST1H1DP16402 221 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 RTL8BQ17RB0 113 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 IDNKQ5T6J7 187 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 MAFIPQ8WZ33 124 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 HARBI1Q96MB7 349 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 ELOVL1Q9BW60 279 aa17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 RANGRFQ9HD47 186 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 ZNF230Q9UIE0 474 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC4-210ENST00000531290 A0A0G2JLM5 398 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 H3BUA1 57 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 MFNGO00587 321 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 SHOXO15266 292 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 GP9P14770 177 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 SCAND1P57086 179 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 PJVKQ0ZLH3 352 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 CROCCP3Q8IVE0 287 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 BVESQ8NE79 360 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 TMEM68Q96MH6 324 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 RNF167Q9H6Y7 350 aa17.15■□□□□ 0.34
TRAPPC4-210ENST00000531290 TMEM127O75204 238 aa17.14■□□□□ 0.33
TRAPPC4-210ENST00000531290 IGLV2-23P01705 113 aa17.14■□□□□ 0.33
TRAPPC4-210ENST00000531290 CLEC2LP0C7M8 214 aa17.14■□□□□ 0.33
TRAPPC4-210ENST00000531290 RRASP10301 218 aa17.14■□□□□ 0.33
TRAPPC4-210ENST00000531290 ETV7Q9Y603 341 aa17.14■□□□□ 0.33
TRAPPC4-210ENST00000531290 CRYGBP07316 175 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 ZP3P21754 424 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 SRSF7Q16629 238 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 CDNFQ49AH0 187 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 TMEM177Q53S58 311 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 LGALS14Q8TCE9 139 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 YIPF6Q96EC8 236 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 ADTRPQ96IZ2 230 aa17.13■□□□□ 0.33
TRAPPC4-210ENST00000531290 OVCH2Q7RTZ1 564 aa17.12■□□□□ 0.33
TRAPPC4-210ENST00000531290 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
TRAPPC4-210ENST00000531290 SBSPONQ8IVN8 264 aa17.12■□□□□ 0.33
TRAPPC4-210ENST00000531290 RSRP1Q9BUV0 290 aa17.12■□□□□ 0.33
TRAPPC4-210ENST00000531290 ANKRD34BA5PLL1 514 aa17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 LSM3P62310 102 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 SSBP2P81877 361 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 VMA21Q3ZAQ7 101 aa17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 Q6ZS49 121 aa17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 PHB2Q99623 299 aa17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
TRAPPC4-210ENST00000531290 SRRM4A7MD48 611 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 AADACP22760 399 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 HACD4Q5VWC8 232 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 H1FOOQ8IZA3 346 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 TEX45Q8NA69 505 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 DIABLOQ9NR28 239 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 COA4Q9NYJ1 87 aa17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 HUWE1Q7Z6Z7 4374 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-210ENST00000531290 MSGN1A6NI15 193 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 TRIM64CA6NLI5 447 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 C3orf84H3BNL1 204 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 BRI3O95415 125 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 FRMD6-AS1P0C7T7 363 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 DTYMKP23919 212 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 DUTP33316 252 aaKnown RBP17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 GNG2P59768 71 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 UBE2KP61086 200 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 ST6GALNAC5Q9BVH7 336 aa17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 TINAGL1Q9GZM7 467 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC4-210ENST00000531290 RYR3Q15413 4870 aa17.08■□□□□ 0.33
TRAPPC4-210ENST00000531290 J3QRK9 145 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 CRYZL1O95825 349 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 CTXN2P0C2S0 81 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 PRSS8Q16651 343 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 TATDN3Q17R31 274 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 HAPLN4Q86UW8 402 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 USMG5Q96IX5 58 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 RCHY1Q96PM5 261 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 FUNDC2Q9BWH2 189 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 ZMAT4Q9H898 229 aa17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 PEF1Q9UBV8 284 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 ELF5Q9UKW6 265 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-210ENST00000531290 IGKV1D-8A0A087WSZ0 117 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 A0A0A6YYH2 397 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 A6NJ64 397 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 MPPED1O15442 326 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 IGLV1-51P01701 117 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 APELAP0DMC3 54 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 KLF5Q13887 457 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 TNXAQ16473 311 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms