RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 DHRS7BQ6IAN0 325 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-211ENST00000531041 TCTEX1D1Q8N7M0 179 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 OR8H1Q8NGG4 311 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 OR51H1Q8NH63 302 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 ZFAND2BQ8WV99 257 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
SF3B2-211ENST00000531041 VSIG4Q9Y279 399 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 FAM181BA6NEQ2 426 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 MPPED1O15442 326 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■■■■□ 22.3
SF3B2-211ENST00000531041 FCGR3BO75015 233 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 TBC1D26Q86UD7 250 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 CCDC71LQ8N9Z2 235 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 POC5Q8NA72 575 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 CD300LFQ8TDQ1 290 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 RITA1Q96K30 269 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 PLSCR3Q9NRY6 295 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-211ENST00000531041 LIN7CQ9NUP9 197 aaKnown RBP13.51□□□□□ -0.25
SF3B2-211ENST00000531041 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
SF3B2-211ENST00000531041 M0QZK8 103 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 NDUFB6O95139 128 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 CRYZL1O95825 349 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 SLC6A1P30531 599 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 OR2B11Q5JQS5 317 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 MZT2BQ6NZ67 158 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 NPBQ8NG41 125 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 OSR1Q8TAX0 266 aaPredicted RBP13.5□□□□□ -0.25
SF3B2-211ENST00000531041 C1RLQ9NZP8 487 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 MOB4Q9Y3A3 225 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
SF3B2-211ENST00000531041 FGF16O43320 207 aa13.49□□□□□ -0.25
SF3B2-211ENST00000531041 RAMP3O60896 148 aa13.49□□□□□ -0.25
SF3B2-211ENST00000531041 LGALS7P47929 136 aa13.49□□□□□ -0.25
SF3B2-211ENST00000531041 F2RL1P55085 397 aa13.49□□□□□ -0.25
SF3B2-211ENST00000531041 RPS16P62249 146 aaKnown RBP13.49□□□□□ -0.25
SF3B2-211ENST00000531041 SRSF2Q01130 221 aaKnown RBP13.49□□□□□ -0.25
SF3B2-211ENST00000531041 TSNAXQ99598 290 aaKnown RBP13.49□□□□□ -0.25
SF3B2-211ENST00000531041 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
SF3B2-211ENST00000531041 SHOXO15266 292 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 NDUFA3O95167 84 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 AMY1AP04745 511 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 CNTFRP26992 372 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 MMDQ15546 238 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 C11orf88Q6PI97 169 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 FAM71E2Q8N5Q1 922 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 C5orf56Q8N8D9 126 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 ADAD2Q8NCV1 583 aaKnown RBP13.48□□□□□ -0.25
SF3B2-211ENST00000531041 HARBI1Q96MB7 349 aa13.48□□□□□ -0.25
SF3B2-211ENST00000531041 C3orf85A0A1B0GTC6 90 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 CRYM-AS1A6NIL9 109 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 NCBP2LA6PVI3 153 aaKnown RBP13.47□□□□□ -0.25
SF3B2-211ENST00000531041 H0Y980 276 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 NBR2O15453 112 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 B3GALNT1O75752 331 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 SPDEFO95238 335 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 HPRT1P00492 218 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 CRYBA1P05813 215 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 DEFA1P59665 94 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 DEFA3P59666 94 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 ZNF585BQ52M93 769 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 Q8N9W7 124 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 NPFFR1Q9GZQ6 430 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 PLEKHA2Q9HB19 425 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 PALMDQ9NP74 551 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TEX13DA0A0J9YY54 714 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-211ENST00000531041 FAM240BA0A1B0GVZ2 78 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 SRRM4A7MD48 611 aaKnown RBP13.47□□□□□ -0.25
SF3B2-211ENST00000531041 RRHO14718 337 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 PEX14O75381 377 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TCRBP04435 133 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 VSIG10L2P0DP72 767 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TMEM128Q5BJH2 165 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TMED4Q7Z7H5 227 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TP53RKQ96S44 253 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 RANBP3Q9H6Z4 567 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-211ENST00000531041 NAA60Q9H7X0 242 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 KIAA1456Q9P272 454 aa13.47□□□□□ -0.25
SF3B2-211ENST00000531041 TNCP24821 2201 aa13.46□□□□□ -0.25
SF3B2-211ENST00000531041 HRASP01112 189 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 AKR1C4P17516 323 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 TAS2R31P59538 309 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 DHODHQ02127 395 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 PSG5Q15238 335 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 GALNT14Q96FL9 552 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 COMMD9Q9P000 198 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 KCNIP3Q9Y2W7 256 aa13.46□□□□□ -0.26
SF3B2-211ENST00000531041 SLC25A17O43808 307 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 TSPAN9O75954 239 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 S1PR2O95136 353 aa13.45□□□□□ -0.26
SF3B2-211ENST00000531041 RPA2P15927 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms