RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 LINC00473A8K010 186 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 IGLV2-14P01704 120 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 CHRNA7P36544 502 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 ARPC4P59998 168 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 FXYD3Q14802 87 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 MSMO1Q15800 293 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 ECSCRQ19T08 205 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 ACTBL2Q562R1 376 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 UNQ5815/PRO19632Q6UWF5 114 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 GVQW1Q8N7I0 195 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 SAMD12Q8N8I0 201 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 ARPC1AQ92747 370 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 TMEM68Q96MH6 324 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 HSD17B10Q99714 261 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 PRELID3BQ9Y3B1 194 aa9.43□□□□□ -0.9
TRAPPC4-209ENST00000528230 IGKV1D-13A0A0B4J2D9 117 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 I3L521 148 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 J3QRK9 145 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ARPC1BO15143 372 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 SOX15O60248 233 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 CNIH1O95406 144 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 SMIM18P0DKX4 95 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 IGKV1-13P0DP09 117 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 CD40LGP29965 261 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 UBE2KP61086 200 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 VBP1P61758 197 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 NCS1P62166 190 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 FHL3Q13643 280 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 VMA21Q3ZAQ7 101 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZNF66Q6ZN08 573 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ANKRD13BQ86YJ7 626 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 LFNGQ8NES3 379 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR11H1Q8NG94 326 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR5AP2Q8NGF4 316 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ACOT12Q8WYK0 555 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 DPF1Q92782 380 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 SLA2Q9H6Q3 261 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 TPSG1Q9NRR2 321 aa9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 AURKAIP1Q9NWT8 199 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-209ENST00000528230 TNCP24821 2201 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 H3BUA1 57 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 BRI3O95415 125 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 CRYZL1O95825 349 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 APOA1P02647 267 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 PRB2P02812 416 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 PTHLHP12272 177 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 FCGR2CP31995 323 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 RORCP51449 518 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 TAS2R20P59543 309 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 EIF4EBP1Q13541 118 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 TMEM69Q5SWH9 247 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 KCTD9Q7L273 389 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR1N2Q8NGR9 330 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 ANAPC10Q9UM13 185 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 A3GALT2U3KPV4 340 aa9.41□□□□□ -0.9
TRAPPC4-209ENST00000528230 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 CREBL2O60519 120 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 FCGR3BO75015 233 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 GABARAPO95166 117 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 PPYP01298 95 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 OR8U8P0C7N1 319 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 NAT1P18440 290 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 AADACP22760 399 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 PRSS3P35030 304 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 ZNF616Q08AN1 781 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 CDK10Q15131 360 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 CTF1Q16619 201 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 PRSS8Q16651 343 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 MRGPRG-AS1Q2M3A8 158 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 DHRS11Q6UWP2 260 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 MFSD4AQ8N468 514 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 GRPEL2Q8TAA5 225 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 SNAPC3Q92966 411 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 MRPS26Q9BYN8 205 aaKnown RBP9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 COMMD3Q9UBI1 195 aa9.4□□□□□ -0.9
TRAPPC4-209ENST00000528230 LGALS1P09382 135 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 KIR2DS2P43631 304 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 ALDH3B2P48448 385 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 RAB25P57735 213 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 KRTAP10-11P60412 298 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 GNB1P62873 340 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 C9orf66Q5T8R8 295 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
TRAPPC4-209ENST00000528230 OR4S2Q8NH73 311 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms